Martin Raden
Orcid: 0000-0002-7926-5911Affiliations:
- Albert Ludwigs University of Freiburg, Department of Computer Science, Germany
According to our database1,
Martin Raden
authored at least 32 papers
between 2007 and 2021.
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Bibliography
2021
Nucleic Acids Res., 2021
2020
Nucleic Acids Res., 2020
The impact of various seed, accessibility and interaction constraints on sRNA target prediction- a systematic assessment.
BMC Bioinform., 2020
pourRNA - a time- and memory-efficient approach for the guided exploration of RNA energy landscapes.
Bioinform., 2020
Fast and accurate structure probability estimation for simultaneous alignment and folding of RNAs with Markov chains.
Algorithms Mol. Biol., 2020
2019
IntaRNAhelix-composing RNA-RNA interactions from stable inter-molecular helices boosts bacterial sRNA target prediction.
J. Bioinform. Comput. Biol., 2019
Integration of accessibility data from structure probing into RNA-RNA interaction prediction.
Bioinform., 2019
Fast and Accurate Structure Probability Estimation for Simultaneous Alignment and Folding of RNAs.
Proceedings of the 19th International Workshop on Algorithms in Bioinformatics, 2019
Constraint Maximal Inter-molecular Helix Lengths within RNA-RNA Interaction Prediction Improves Bacterial sRNA Target Prediction.
Proceedings of the 12th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2019), 2019
2018
Nucleic Acids Res., 2018
2017
Nucleic Acids Res., 2017
2015
antaRNA - Multi-objective inverse folding of pseudoknot RNA using ant-colony optimization.
BMC Bioinform., 2015
2014
CopraRNA and IntaRNA: predicting small RNA targets, networks and interaction domains.
Nucleic Acids Res., 2014
MoDPepInt: an interactive web server for prediction of modular domain-peptide interactions.
Bioinform., 2014
2013
Proceedings of the Theory and Practice of Model Transformations, 2013
Proceedings of the Principles and Practice of Constraint Programming, 2013
2012
Producing High-Accuracy Lattice Models from Protein Atomic Coordinates Including Side Chains.
Adv. Bioinformatics, 2012
2010
Proceedings of the Workshop on Constraint Based Methods for Bioinformatics, 2010
Proceedings of the German Conference on Bioinformatics 2010, 2010
2009
Constraint-based Local Move Definitions for Lattice Protein Models Including Side Chains
CoRR, 2009
CoRR, 2009
2008
CPSP-tools - Exact and complete algorithms for high-throughput 3D lattice protein studies.
BMC Bioinform., 2008
2007