Matteo Chiara

According to our database, Matteo Chiara authored at least 13 papers between 2020 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Supporting data and code for "Data-driven recombination detection in viral genomes".

Tommaso Alfonsi, Anna Bernasconi, Matteo Chiara, Stefano Ceri

Dataset, March, 2024

Supporting data and code for "Data-driven recombination detection in viral genomes".

Tommaso Alfonsi, Anna Bernasconi, Matteo Chiara, Stefano Ceri

Dataset, February, 2024

2023

Supporting data and code for "Data-driven recombination detection in viral genomes".

Tommaso Alfonsi, Anna Bernasconi, Matteo Chiara, Stefano Ceri

Dataset, November, 2023

Supporting data and code for "Data-driven recombination detection in viral genomes".

Tommaso Alfonsi, Anna Bernasconi, Matteo Chiara, Stefano Ceri

Dataset, July, 2023

UTRdb 2.0: a comprehensive, expert curated catalog of eukaryotic mRNAs untranslated regions.

Claudio Lo Giudice, Federico Zambelli, Matteo Chiara, Giulio Pavesi, Marco Antonio Tangaro, Ernesto Picardi, Graziano Pesole

Nucleic Acids Res., January, 2023

VariantHunter: a method and tool for fast detection of emerging SARS-CoV-2 variants.

Pietro Pinoli, Arif Canakoglu, Stefano Ceri, Matteo Chiara, Erika Ferrandi, Luca Minotti, Anna Bernasconi

Database J. Biol. Databases Curation, 2023

2022

ViruClust: direct comparison of SARS-CoV-2 genomes and genetic variants in space and time.

Luca Cilibrasi, Pietro Pinoli, Anna Bernasconi, Arif Canakoglu, Matteo Chiara, Stefano Ceri

Bioinform., 2022

2021

Laniakea@ReCaS: exploring the potential of customisable Galaxy on-demand instances as a cloud-based service.

Marco Antonio Tangaro, Pietro Mandreoli, Matteo Chiara, Giacinto Donvito, Marica Antonacci, Antonio Parisi, Angelica Bianco, Angelo Romano, Daniela Manila Bianchi, Davide Cangelosi, Paolo Uva, Ivan Molineris, Vladimir Nosi, Raffaele A. Calogero, Luca Alessandrì, Elena Pedrini, Marina Mordenti, Emanuele Bonetti, Luca Sangiorgi, Graziano Pesole, Federico Zambelli

BMC Bioinform., 2021

CorGAT: a tool for the functional annotation of SARS-CoV-2 genomes.

Matteo Chiara, Federico Zambelli, Marco Antonio Tangaro, Pietro Mandreoli, David Stephen Horner, Graziano Pesole

Bioinform., 2021

VINYL: Variant prIoritizatioN bY survivaL analysis.

Matteo Chiara, Pietro Mandreoli, Marco Antonio Tangaro, Anna Maria D'Erchia, Sandro Sorrentino, Cinzia Forleo, David Stephen Horner, Federico Zambelli, Graziano Pesole

Bioinform., 2021

Next generation sequencing of SARS-CoV-2 genomes: challenges, applications and opportunities.

Matteo Chiara, Anna Maria D'Erchia, Carmela Gissi, Caterina Manzari, Antonio Parisi, Nicoletta Resta, Federico Zambelli, Ernesto Picardi, Giulio Pavesi, David Stephen Horner, Graziano Pesole

Briefings Bioinform., 2021

2020

ELIXIR-IT HPC@CINECA: high performance computing resources for the bioinformatics community.

Tiziana Castrignanò, Silvia Gioiosa, Tiziano Flati, Mirko Cestari, Ernesto Picardi, Matteo Chiara, Maddalena Fratelli, Stefano Amente, Marco Cirilli, Marco Antonio Tangaro, Giovanni Chillemi, Graziano Pesole, Federico Zambelli

BMC Bioinform., 2020

Critical assessment of bioinformatics methods for the characterization of pathological repeat expansions with single-molecule sequencing data.

Matteo Chiara, Federico Zambelli, Ernesto Picardi, David Stephen Horner, Graziano Pesole

Briefings Bioinform., 2020