Michael A. Charleston

According to our database, Michael A. Charleston authored at least 29 papers between 1994 and 2024.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of three.

2024

What makes a small-world network? Leveraging machine learning for the robust prediction and classification of networks.

Raima Carol Appaw, Nicholas Fountain-Jones, Michael A. Charleston

CoRR, 2024

2020

Bioacoustics Data Analysis - A Taxonomy, Survey and Open Challenges.

K. V. S. N. Rama Rao, James Montgomery, Saurabh Kumar Garg, Michael A. Charleston

IEEE Access, 2020

2019

Molecular Phylogenetics.

Michael A. Charleston

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019

Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia.

Maria Victoria Schneider, Philippa C. Griffin, Sonika Tyagi, Madison Flannery, Saravanan Dayalan, Simon Gladman, Nathan S. Watson-Haigh, Philipp E. Bayer, Michael A. Charleston, Ira Cooke, Rob Cook, Richard J. Edwards, David Edwards, Dominique Gorse, Malcolm J. McConville, David Powell, Marc R. Wilkins, Andrew Lonie

Briefings Bioinform., 2019

2016

Biological Network Edit Distance.

Martin McGrane, Michael A. Charleston

J. Comput. Biol., 2016

RASCAL: A Randomized Approach for Coevolutionary Analysis.

Benjamin Drinkwater, Michael A. Charleston

J. Comput. Biol., 2016

Towards sub-quadratic time and space complexity solutions for the dated tree reconciliation problem.

Benjamin Drinkwater, Michael A. Charleston

Algorithms Mol. Biol., 2016

Mining autograding data in computer science education.

Vincent Gramoli, Michael A. Charleston, Bryn Jeffries, Irena Koprinska, Martin McGrane, Alex Radu, Anastasios Viglas, Kalina Yacef

Proceedings of the Australasian Computer Science Week Multiconference, 2016

2015

Evolving Nutritional Strategies in the Presence of Competition: A Geometric Agent-Based Model.

Alistair M. Senior, Michael A. Charleston, Mathieu Lihoreau, Jérôme Buhl, David Raubenheimer, Stephen J. Simpson

PLoS Comput. Biol., 2015

Node Handprinting: A Scalable and Accurate Algorithm for Aligning Multiple Biological Networks.

Alex Radu, Michael A. Charleston

J. Comput. Biol., 2015

A time and space complexity reduction for coevolutionary analysis of trees generated under both a Yule and Uniform model.

Benjamin Drinkwater, Michael A. Charleston

Comput. Biol. Chem., 2015

Simple, rapid and accurate genotyping-by-sequencing from aligned whole genomes with ArrayMaker.

Cali E. Willet, Bianca Haase, Michael A. Charleston, Claire M. Wade

Bioinform., 2015

A Sub-quadratic Time and Space Complexity Solution for the Dated Tree Reconciliation Problem for Select Tree Topologies.

Benjamin Drinkwater, Michael A. Charleston

Proceedings of the Algorithms in Bioinformatics - 15th International Workshop, 2015

2014

Node Fingerprinting: An Efficient Heuristic for Aligning Biological Networks.

Alex Radu, Michael A. Charleston

J. Comput. Biol., 2014

Introducing TreeCollapse: a novel greedy algorithm to solve the cophylogeny reconstruction problem.

Benjamin Drinkwater, Michael A. Charleston

BMC Bioinform., 2014

2013

Active Subnetwork Recovery with a Mechanism-Dependent Scoring Function; with application to Angiogenesis and Organogenesis studies.

Ilana Lichtenstein, Michael A. Charleston, Tibério S. Caetano, Jennifer R. Gamble, Mathew A. Vadas

BMC Bioinform., 2013

A conceptual model for reflecting on expected learning vs. demonstrated student performance.

Richard Gluga, Judy Kay, Raymond Lister, Simon, Michael A. Charleston, James Harland, Donna Teague

Proceedings of the Fifteenth Australasian Computing Education Conference, 2013

2011

Verification of phylogenetic Inference Programs Using Metamorphic Testing.

Md. Shaik Sadi, Fei-Ching Kuo, Joshua Wing Kei Ho, Michael A. Charleston, Tsong Yueh Chen

J. Bioinform. Comput. Biol., 2011

2009

On the Computational Complexity of the Reticulate Cophylogeny Reconstruction Problem.

Ran Libeskind-Hadas, Michael A. Charleston

J. Comput. Biol., 2009

2008

Phylogenetic estimation with partial likelihood tensors

Jeremy G. Sumner, Michael A. Charleston

CoRR, 2008

Differential variability analysis of gene expression and its application to human diseases.

Joshua Wing Kei Ho, Maurizio Stefani, Cristobal G. dos Remedios, Michael A. Charleston

Proceedings of the Proceedings 16th International Conference on Intelligent Systems for Molecular Biology (ISMB), 2008

2007

A Novel Algorithm for Adaptive and Neutral Evolutionary Patterns Associated with HIV Drug Resistance.

Ali Al Mazari, Albert Y. Zomaya, Michael A. Charleston, Roger J. Garsia

Proceedings of the 2007 IEEE/ACS International Conference on Computer Systems and Applications (AICCSA 2007), 2007

2006

Traversing the tangle: Algorithms and applications for cophylogenetic studies.

Michael A. Charleston, Susan L. Perkins

J. Biomed. Informatics, 2006

A cophylogenetic perspective on host-pathogen evolution.

Michael A. Charleston, Alison P. Galvani

Proceedings of the Disease Evolution: Models, 2006

2001

Hitch-Hiking: A Parallel Heuristic Search Strategy, Applied to the Phylogeny Problem.

Michael A. Charleston

J. Comput. Biol., 2001

1998

Spectrum: spectral analysis of phylogenetic data.

Michael A. Charleston

Bioinform., 1998

1996

Reconciled trees and incongruent gene and species trees.

Roderic D. M. Page, Michael A. Charleston

Proceedings of the Mathematical Hierarchies and Biology, 1996

1995

Toward a Characterization of Landscapes of Combinatorial Optimization Problems, with Special Attention to the Phylogeny Problem.

Michael A. Charleston

J. Comput. Biol., 1995

1994

The Effects of Sequence Length, Tree Topology, and Number of Taxa on the Performance of Phylogenetic Methods.

Michael A. Charleston, Michael D. Hendy, David Penny

J. Comput. Biol., 1994