Michael Krauthammer

According to our database1, Michael Krauthammer authored at least 52 papers between 2000 and 2018.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.



In proceedings 
PhD thesis 


On csauthors.net:


Prototyping a precision oncology 3.0 rapid learning platform.
BMC Bioinformatics, 2018

Toward automated assessment of health Web page quality using the DISCERN instrument.
JAMIA, 2017

PySeqLab: an open source Python package for sequence labeling and segmentation.
Bioinformatics, 2017

A Clinical Decision Support System for Monitoring Post-Colonoscopy Patient Follow-Up and Scheduling.
Proceedings of the Summit on Clinical Research Informatics, 2017

Decentralized provenance-aware publishing with nanopublications.
PeerJ PrePrints, 2016

Decentralized provenance-aware publishing with nanopublications.
PeerJ Computer Science, 2016

Global copy number profiling of cancer genomes.
Bioinformatics, 2016

Controlling testing volume for respiratory viruses using machine learning and text mining.
Proceedings of the AMIA 2016, 2016

Mutadelic: mutation analysis using description logic inferencing capabilities.
Bioinformatics, 2015

iCyrus: A Semantic Framework for Biomedical Image Discovery.
Proceedings of the 8th Semantic Web Applications and Tools for Life Sciences International Conference, 2015

Publishing Without Publishers: A Decentralized Approach to Dissemination, Retrieval, and Archiving of Data.
Proceedings of the Semantic Web - ISWC 2015, 2015

BIM: an open ontology for the annotation of biomedical images.
Proceedings of the International Conference on Biomedical Ontology, 2015

Mining images in biomedical publications: Detection and analysis of gel diagrams.
J. Biomedical Semantics, 2014

SEBI: An Architecture for Biomedical Image Discovery, Interoperability and Reusability Based on Semantic Enrichment.
Proceedings of the 7th International Workshop on Semantic Web Applications and Tools for Life Sciences, 2014

Complementary ensemble clustering of biomedical data.
Journal of Biomedical Informatics, 2013

Broadening the Scope of Nanopublications.
Proceedings of the Semantic Web: Semantics and Big Data, 10th International Conference, 2013

Next Generation Cancer Data Discovery, Access, and Integration Using Prizms and Nanopublications.
Proceedings of the Data Integration in the Life Sciences - 9th International Conference, 2013

Nanorecords: A Novel Approach to Communicating High-Level Medical Information.
Proceedings of the AMIA 2013, 2013

A semantic web framework to integrate cancer omics data with biological knowledge.
BMC Bioinformatics, 2012

Underspecified Scientific Claims in Nanopublications.
Proceedings of the Web of Linked Entities Workshop, Boston, USA, November 11, 2012, 2012

Enhancing Clustering by Exploiting Complementary Data Modalities in the Medical Domain.
Proceedings of the Artificial Intelligence Applications and Innovations, 2012

Estimating a gene's mutation burden by the number of observed synonymous base substitutions.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

Finding and Accessing Diagrams in Biomedical Publications.
Proceedings of the AMIA 2012, 2012

MU2A - reconciling the genome and transcriptome to determine the effects of base substitutions.
Bioinformatics, 2011

A new pivoting and iterative text detection algorithm for biomedical images.
Journal of Biomedical Informatics, 2010

Analysis of Cancer Omics Data In A Semantic Web Framework.
Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, 2010

Structural similarity assessment for drug sensitivity prediction in cancer.
BMC Bioinformatics, 2009

Semantic web data warehousing for caGrid.
BMC Bioinformatics, 2009

Controlled Natural Language for Clinical Practice Guidelines.
Proceedings of the Pre-Proceedings of the Workshop on Controlled Natural Language (CNL 2009), 2009

Writing Clinical Practice Guidelines in Controlled Natural Language.
Proceedings of the Controlled Natural Language, Workshop on Controlled Natural Language, 2009

Embedding the Guideline Elements Model in Web Ontology Language.
Proceedings of the AMIA 2009, 2009

Enriching PubMed Related Article Search with Sentence Level Co-citations.
Proceedings of the AMIA 2009, 2009

Yale Image Finder (YIF): a new search engine for retrieving biomedical images.
Bioinformatics, 2008

Term Mapping Using Matrix Operations.
Proceedings of the Ontologies and Text Mining for Life Sciences: Current Status and Future Perspectives, 24.03., 2008

Leveraging the structure of the Semantic Web to enhance information retrieval for proteomics.
Bioinformatics, 2007

A semantic web approach to biological pathway data reasoning and integration.
J. Web Semant., 2006

Shallow Semantic Parsing of Randomized Controlled Trial Reports.
Proceedings of the AMIA 2006, 2006

Towards Semantic Role Labeling & IE in the Medical Literature.
Proceedings of the AMIA 2005, 2005

GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data.
Journal of Biomedical Informatics, 2004

Term identification in the biomedical literature.
Journal of Biomedical Informatics, 2004

Probabilistic inference of molecular networks from noisy data sources.
Bioinformatics, 2004

A Native XML Database Design for Clinical Document Research.
Proceedings of the AMIA 2003, 2003

Of truth and pathways: chasing bits of information through myriads of articles.
Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology, 2002

Representing nested semantic information in a linear string of text using XML.
Proceedings of the AMIA 2002, 2002

GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles.
Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology, 2001

GeneWays: A System for Mining Text and for Integrating Data on Molecular Pathways.
Proceedings of the Computer science and biology: Proceedings of the German Conference on Bioinformatics, 2001

Linking Protein Interaction Data to the MESH Hierarchy.
Proceedings of the AMIA 2001, 2001

A knowledge model for the interpretation and visualization of NLP-parsed discharged summaries.
Proceedings of the AMIA 2001, 2001

A knowledge model for analysis and simulation of regulatory networks.
Bioinformatics, 2000

Designing a Navigational Ontology for Browsing and Accessing 3D Anatomical Images.
Proceedings of the AMIA 2000, 2000

Knowledge Sharing in the Construction of an Anatomical Navigational Ontology.
Proceedings of the AMIA 2000, 2000

Using BLAST, A DNA and Protein Sequence Comparison Tool, for Finding Gene and Protein Names in Journal Articles.
Proceedings of the AMIA 2000, 2000