Mikaël Salson

According to our database, Mikaël Salson authored at least 17 papers between 2008 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

REINDEER2: Practical Abundance Index at Scale.

Yohan Hernandez-Courbevoie, Mikaël Salson, Chloé Bessière, Haoliang Xue, Daniel Gautheret, Camille Marchet, Antoine Limasset

Proceedings of the String Processing and Information Retrieval, 2025

2024

On the number of <i>k</i>-mers admitting a given lexicographical minimizer.

Florian Ingels, Camille Marchet, Mikaël Salson

CoRR, 2024

2023

Méthodes sans alignement et indexation pour l'analyse de données nucléiques massives.

Mikaël Salson

, 2023

2022

Publisher Correction: Frugal alignment-free identification of FLT3-internal tandem duplications with FiLT3r.

Augustin Boudry, Sasha Darmon, Nicolas Duployez, Martin Figeac, Sandrine Geffroy, Maxime Bucci, Karine Celli-Lebras, Matthieu Duchmann, Romane Joudinaud, Laurène Fenwarth, Olivier Nibourel, Laure Goursaud, Raphael Itzykson, Hervé Dombret, Mathilde Hunault, Claude Preudhomme, Mikaël Salson

BMC Bioinform., 2022

Frugal alignment-free identification of FLT3-internal tandem duplications with FiLT3r.

Augustin Boudry, Sasha Darmon, Nicolas Duployez, Martin Figeac, Sandrine Geffroy, Maxime Bucci, Karine Celli-Lebras, Matthieu Duchmann, Romane Joudinaud, Laurène Fenwarth, Olivier Nibourel, Laure Goursaud, Raphael Itzykson, Hervé Dombret, Mathilde Hunault, Claude Preudhomme, Mikaël Salson

BMC Bioinform., 2022

2020

REINDEER: efficient indexing of k-mer presence and abundance in sequencing datasets.

Camille Marchet, Zamin Iqbal, Daniel Gautheret, Mikaël Salson, Rayan Chikhi

Bioinform., 2020

2018

Indexing labeled sequences.

Tatiana Rocher, Mathieu Giraud, Mikaël Salson

PeerJ Comput. Sci., 2018

2017

SimBA: A methodology and tools for evaluating the performance of RNA-Seq bioinformatic pipelines.

Jerome Audoux, Mikaël Salson, Christophe F. Grosset, Sacha Beaumeunier, Jean-Marc Holder, Therese Commes, Nicolas Philippe

BMC Bioinform., 2017

2016

Efficient dynamic range minimum query.

Alice Héliou, Martine Léonard, Laurent Mouchard, Mikaël Salson

Theor. Comput. Sci., 2016

Approximate search of short patterns with high error rates using the 01^⁎0 lossless seeds.

Christophe Vroland, Mikaël Salson, Sébastien Bini, Hélène Touzet

J. Discrete Algorithms, 2016

2014

Lossless Seeds for Searching Short Patterns with High Error Rates.

Christophe Vroland, Mikaël Salson, Hélène Touzet

Proceedings of the Combinatorial Algorithms - 25th International Workshop, 2014

2012

On the number of elements to reorder when updating a suffix array.

Martine Léonard, Laurent Mouchard, Mikaël Salson

J. Discrete Algorithms, 2012

A Scalable Indexing Solution to Mine Huge Genomic Sequence Collections.

Eric Rivals, Nicolas Philippe, Mikaël Salson, Martine Léonard, Therese Commes, Thierry Lecroq

ERCIM News, 2012

2011

Querying large read collections in main memory: a versatile data structure.

Nicolas Philippe, Mikaël Salson, Thierry Lecroq, Martine Léonard, Therese Commes, Eric Rivals

BMC Bioinform., 2011

2010

Dynamic extended suffix arrays.

Mikaël Salson, Thierry Lecroq, Martine Léonard, Laurent Mouchard

J. Discrete Algorithms, 2010

2009

A four-stage algorithm for updating a Burrows-Wheeler transform.

Mikaël Salson, Thierry Lecroq, Martine Léonard, Laurent Mouchard

Theor. Comput. Sci., 2009

2008

Dynamic Burrows-Wheeler Transform.

Mikaël Salson, Thierry Lecroq, Martine Léonard, Laurent Mouchard

Proceedings of the Prague Stringology Conference 2008, Prague, Czech Republic, 2008