Min Zeng

Orcid: 0000-0002-1726-0955

Affiliations:
  • Central South University, Changsha, China


According to our database1, Min Zeng authored at least 51 papers between 2018 and 2025.

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Bibliography

2025
GateFuseNet: An Adaptive 3D Multimodal Neuroimaging Fusion Network for Parkinson's Disease Diagnosis.
CoRR, October, 2025

From Charts to Code: A Hierarchical Benchmark for Multimodal Models.
CoRR, October, 2025

Contrastive Regularization over LoRA for Multimodal Biomedical Image Incremental Learning.
CoRR, August, 2025

CellCircLoc: Deep Neural Network for Predicting and Explaining Cell Line-Specific CircRNA Subcellular Localization.
IEEE J. Biomed. Health Informatics, February, 2025

DDLB: Using the Protein Language Model and Hierarchical Architecture to Improve Disordered Lipid-Binding Residues Prediction.
Proceedings of the Bioinformatics Research and Applications - 21st International Symposium, 2025

2024
Rapid screening of multi-point mutations for enzyme thermostability modification by utilizing computational tools.
Future Gener. Comput. Syst., 2024

SGCL-LncLoc: An Interpretable Deep Learning Model for Improving IncRNA Subcellular Localization Prediction with Supervised Graph Contrastive Learning.
Big Data Min. Anal., 2024

A comprehensive computational benchmark for evaluating deep learning-based protein function prediction approaches.
Briefings Bioinform., 2024

Aligning Multimodal Biomedical Images and Language via One Large Vision-Language Model.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

ComLMEss: Combining multiple protein language models enables accurate essential protein prediction.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

DP-BERT: a pre-trained deep language model for depression prediction using microarray data.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2024

2023
LncLocFormer: a Transformer-based deep learning model for multi-label lncRNA subcellular localization prediction by using localization-specific attention mechanism.
Bioinform., December, 2023

ViPal: A framework for virulence prediction of influenza viruses with prior viral knowledge using genomic sequences.
J. Biomed. Informatics, June, 2023

A review of enzyme design in catalytic stability by artificial intelligence.
Briefings Bioinform., May, 2023

DeepCellEss: cell line-specific essential protein prediction with attention-based interpretable deep learning.
Bioinform., January, 2023

CRMSS: predicting circRNA-RBP binding sites based on multi-scale characterizing sequence and structure features.
Briefings Bioinform., January, 2023

Inferring disease-associated circRNAs by multi-source aggregation based on heterogeneous graph neural network.
Briefings Bioinform., January, 2023

GraphLncLoc: long non-coding RNA subcellular localization prediction using graph convolutional networks based on sequence to graph transformation.
Briefings Bioinform., January, 2023

A Deep Learning Framework for Predicting Protein Functions With Co-Occurrence of GO Terms.
IEEE ACM Trans. Comput. Biol. Bioinform., 2023

Singularformer: Learning to Decompose Self-Attention to Linearize the Complexity of Transformer.
Proceedings of the Thirty-Second International Joint Conference on Artificial Intelligence, 2023

Protein function prediction using graph neural network with multi-type biological knowledge.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

DILM-ICD: A Deep Iterative Learning Model for Automatic ICD Coding.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022
A Pseudo Label-Wise Attention Network for Automatic ICD Coding.
IEEE J. Biomed. Health Informatics, 2022

Accurate Prediction of Human Essential Proteins Using Ensemble Deep Learning.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022

KAICD: A knowledge attention-based deep learning framework for automatic ICD coding.
Neurocomputing, 2022

BridgeDPI: a novel Graph Neural Network for predicting drug-protein interactions.
Bioinform., 2022

DeepLncLoc: a deep learning framework for long non-coding RNA subcellular localization prediction based on subsequence embedding.
Briefings Bioinform., 2022

A framework for predicting variable-length epitopes of human-adapted viruses using machine learning methods.
Briefings Bioinform., 2022

ASNet: An Adversarial Sparse Network for Multi-task Biomedical Named Entity Recognition.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

LDAGSO: Predicting 1ncRNA-Disease Associations from Graph Sequences and Disease Ontology via Deep Learning techniques.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022

2021
Deep Matrix Factorization Improves Prediction of Human CircRNA-Disease Associations.
IEEE J. Biomed. Health Informatics, 2021

A Deep Learning Framework for Gene Ontology Annotations With Sequence- and Network-Based Information.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021

DMFLDA: A Deep Learning Framework for Predicting lncRNA-Disease Associations.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021

A Deep Learning Framework for Identifying Essential Proteins by Integrating Multiple Types of Biological Information.
IEEE ACM Trans. Comput. Biol. Bioinform., 2021

Essential Protein Prediction Based on node2vec and XGBoost.
J. Comput. Biol., 2021

DeepPPF: A deep learning framework for predicting protein family.
Neurocomputing, 2021

A Pseudo Label-wise Attention Network for Automatic ICD Coding.
CoRR, 2021

BridgeDPI: A Novel Graph Neural Network for Predicting Drug-Protein Interactions.
CoRR, 2021

Improving circRNA-disease association prediction by sequence and ontology representations with convolutional and recurrent neural networks.
Bioinform., 2021

Improving human essential protein prediction using only protein sequences via ensemble learning.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021

2020
NEDD: a network embedding based method for predicting drug-disease associations.
BMC Bioinform., 2020

PROBselect: accurate prediction of protein-binding residues from proteins sequences via dynamic predictor selection.
Bioinform., 2020

Protein-protein interaction site prediction through combining local and global features with deep neural networks.
Bioinform., 2020

Network-based methods for predicting essential genes or proteins: a survey.
Briefings Bioinform., 2020

Ess-NEXG: Predict Essential Proteins by Constructing a Weighted Protein Interaction Network Based on Node Embedding and XGBoost.
Proceedings of the Bioinformatics Research and Applications - 16th International Symposium, 2020

2019
Automated ICD-9 Coding via A Deep Learning Approach.
IEEE ACM Trans. Comput. Biol. Bioinform., 2019

Automatic ICD-9 coding via deep transfer learning.
Neurocomputing, 2019

DeepEP: a deep learning framework for identifying essential proteins.
BMC Bioinform., 2019

LncRNA-disease association prediction through combining linear and non-linear features with matrix factorization and deep learning techniques.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

HNEDTI: Prediction of drug-target interaction based on heterogeneous network embedding.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019

2018
A Deep Learning Framework for Identifying Essential Proteins Based on Protein-Protein Interaction Network and Gene Expression Data.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018


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