Omar Y. Ahmed

According to our database, Omar Y. Ahmed authored at least 7 papers between 2021 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

Mem-based pangenome indexing for k-mer queries.

Stephen Hwang, Nathaniel K. Brown, Omar Y. Ahmed, Katharine M. Jenike, Sam Kovaka, Michael C. Schatz, Ben Langmead

Algorithms Mol. Biol., December, 2025

2024

StephenHwang/MEMO_experiments.

Stephen Hwang, Nathaniel K. Brown, Omar Y. Ahmed, Katharine M. Jenike, Sam Kovaka, Michael C. Schatz, Ben Langmead

Dataset, November, 2024

StephenHwang/MEMO.

Stephen Hwang, Nathaniel K. Brown, Omar Y. Ahmed, Katharine M. Jenike, Sam Kovaka, Michael C. Schatz, Ben Langmead

Dataset, November, 2024

Sigmoni: classification of nanopore signal with a compressed pangenome index.

Vikram Shivakumar, Omar Y. Ahmed, Sam Kovaka, Mohsen Zakeri, Ben Langmead

Bioinform., 2024

Taxonomic Classification with Maximal Exact Matches in KATKA Kernels and Minimizer Digests.

Dominika Draesslerová, Omar Y. Ahmed, Travis Gagie, Jan Holub, Ben Langmead, Giovanni Manzini, Gonzalo Navarro

Proceedings of the 22nd International Symposium on Experimental Algorithms, 2024

2022

Closed-Loop Diesel Combustion Control Leveraging Ignition Assist.

Omar Y. Ahmed, Robert J. Middleton, Anna G. Stefanopoulou, Kenneth S. Kim, Chol-Bum M. Kweon

IEEE Control. Syst. Lett., 2022

2021

Megadepth: efficient coverage quantification for BigWigs and BAMs.

Christopher Wilks, Omar Y. Ahmed, Daniel N. Baker, David Zhang, Leonardo Collado-Torres, Ben Langmead

Bioinform., 2021