Ondrej Vavra

Orcid: 0000-0003-1396-2543

According to our database1, Ondrej Vavra authored at least 7 papers between 2016 and 2023.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

On csauthors.net:

Bibliography

2023
pyCaverDock: Python implementation of the popular tool for analysis of ligand transport with advanced caching and batch calculation support.
Bioinform., August, 2023

2020
CaverDock: A Novel Method for the Fast Analysis of Ligand Transport.
IEEE ACM Trans. Comput. Biol. Bioinform., 2020

DockVis: Visual Analysis of Molecular Docking Trajectories.
Comput. Graph. Forum, 2020

2019
Caver Web 1.0: identification of tunnels and channels in proteins and analysis of ligand transport.
Nucleic Acids Res., 2019

CaverDock: a molecular docking-based tool to analyse ligand transport through protein tunnels and channels.
Bioinform., 2019

Visual Analysis of Ligand Trajectories in Molecular Dynamics.
Proceedings of the IEEE Pacific Visualization Symposium, 2019

2016
HotSpot Wizard 2.0: automated design of site-specific mutations and smart libraries in protein engineering.
Nucleic Acids Res., 2016


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