Osamu Hirose

According to our database, Osamu Hirose authored at least 19 papers between 2005 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Geodesic-Based Bayesian Coherent Point Drift.

Osamu Hirose

IEEE Trans. Pattern Anal. Mach. Intell., May, 2023

2021

Erratum to "A Bayesian Formulation of Coherent Point Drift".

Osamu Hirose

IEEE Trans. Pattern Anal. Mach. Intell., 2021

Acceleration of Non-Rigid Point Set Registration With Downsampling and Gaussian Process Regression.

Osamu Hirose

IEEE Trans. Pattern Anal. Mach. Intell., 2021

A Bayesian Formulation of Coherent Point Drift.

Osamu Hirose

IEEE Trans. Pattern Anal. Mach. Intell., 2021

2018

SPF-CellTracker: Tracking Multiple Cells with Strongly-Correlated Moves Using a Spatial Particle Filter.

Osamu Hirose, Shotaro Kawaguchi, Terumasa Tokunaga, Yu Toyoshima, Takayuki Teramoto, Sayuri Kuge, Takeshi Ishihara, Yuichi Iino, Ryo Yoshida

IEEE ACM Trans. Comput. Biol. Bioinform., 2018

2017

Dependent landmark drift: robust point set registration based on the Gaussian mixture model with a statistical shape model.

Osamu Hirose

CoRR, 2017

2016

Accurate Automatic Detection of Densely Distributed Cell Nuclei in 3D Space.

Yu Toyoshima, Terumasa Tokunaga, Osamu Hirose, Manami Kanamori, Takayuki Teramoto, Moon Sun Jang, Sayuri Kuge, Takeshi Ishihara, Ryo Yoshida, Yuichi Iino

PLoS Comput. Biol., 2016

2015

SPY: A Novel Resampling Method for Improving Classification Performance in Imbalanced Data.

Xuan Tho Dang, Dang Hung Tran, Osamu Hirose, Kenji Satou

Proceedings of the 2015 Seventh International Conference on Knowledge and Systems Engineering, 2015

2014

Inference of domain-domain interactions by matrix factorisation and domain-level features.

Thi Tu Kien Le, Osamu Hirose, Thi Lan Anh Nguyen, Thammakorn Saethang, Vu Anh Tran, Xuan Tho Dang, Duc Luu Ngo, Mamoru Kubo, Yoichi Yamada, Kenji Satou

Int. J. Funct. Informatics Pers. Medicine, 2014

Automated detection and tracking of many cells by using 4D live-cell imaging data.

Terumasa Tokunaga, Osamu Hirose, Shotaro Kawaguchi, Yu Toyoshima, Takayuki Teramoto, Hisaki Ikebata, Sayuri Kuge, Takeshi Ishihara, Yuichi Iino, Ryo Yoshida

Bioinform., 2014

2013

TIGAR: transcript isoform abundance estimation method with gapped alignment of RNA-Seq data by variational Bayesian inference.

Naoki Nariai, Osamu Hirose, Kaname Kojima, Masao Nagasaki

Bioinform., 2013

2012

EpicCapo: epitope prediction using combined information of amino acid pairwise contact potentials and HLA-peptide contact site information.

Thammakorn Saethang, Osamu Hirose, Ingorn Kimkong, Vu Anh Tran, Xuan Tho Dang, Thi Lan Anh Nguyen, Thi Tu Kien Le, Mamoru Kubo, Yoichi Yamada, Kenji Satou

BMC Bioinform., 2012

2011

SiGN-SSM: open source parallel software for estimating gene networks with state space models.

Yoshinori Tamada, Rui Yamaguchi, Seiya Imoto, Osamu Hirose, Ryo Yoshida, Masao Nagasaki, Satoru Miyano

Bioinform., 2011

2010

Prediction of Carbohydrate-Binding Proteins from Sequences Using Support Vector Machines.

Seizi Someya, Masanori Kakuta, Mizuki Morita, Kazuya Sumikoshi, Cao Wei, Ge Zhenyi, Osamu Hirose, Shugo Nakamura, Tohru Terada, Kentaro Shimizu

Adv. Bioinformatics, 2010

A Self-organizing State Space Approach to Inferring Time-Varying Causalities between Regulatory Proteins.

Osamu Hirose, Kentaro Shimizu

Proceedings of the Information Technology in Bio- and Medical Informatics, 2010

2008

Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models.

Osamu Hirose, Ryo Yoshida, Seiya Imoto, Rui Yamaguchi, Tomoyuki Higuchi, Stephen D. Charnock-Jones, Cristin G. Print, Satoru Miyano

Bioinform., 2008

Analyzing Time Course Gene Expression Data with Biological and Technical Replicates to Estimate Gene Networks by State Space Models.

Osamu Hirose, Ryo Yoshida, Rui Yamaguchi, Seiya Imoto, Tomoyuki Higuchi, Satoru Miyano

Proceedings of the Second Asia International Conference on Modelling and Simulation, 2008

2007

Anisotropic Potential Field Maximization Model for Subjective Contour from Line Figure.

Osamu Hirose, Tomoharu Nagao

Proceedings of the Advances in Visual Computing, Third International Symposium, 2007

2005

Estimating Gene Networks from Expression Data and Binding Location Data via Boolean Networks.

Osamu Hirose, Naoki Nariai, Yoshinori Tamada, Hideo Bannai, Seiya Imoto, Satoru Miyano

Proceedings of the Computational Science and Its Applications, 2005