Ryo Yoshida

According to our database1, Ryo Yoshida authored at least 36 papers between 1993 and 2017.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Other 

Links

On csauthors.net:

Bibliography

2017
Bayesian molecular design with a chemical language model.
Journal of Computer-Aided Molecular Design, 2017

2016
Accurate Automatic Detection of Densely Distributed Cell Nuclei in 3D Space.
PLoS Computational Biology, 2016

2015
SPF-CellTracker: Tracking multiple cells with strongly-correlated moves using a spatial particle filter.
CoRR, 2015

Repulsive parallel MCMC algorithm for discovering diverse motifs from large sequence sets.
Bioinformatics, 2015

2014
Atom Environment Kernels on Molecules.
Journal of Chemical Information and Modeling, 2014

Automated detection and tracking of many cells by using 4D live-cell imaging data.
Bioinformatics, 2014

2013
Self-oscillating polymer gels as novel biomimetic materials.
Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2013

A study on EGG affected by viscosity and shear rate dependence of fluid and semi-solid diets.
Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2013

2012
Identifying Gene Pathways Associated with Cancer Characteristics via Sparse Statistical Methods.
IEEE/ACM Trans. Comput. Biology Bioinform., 2012

2011
SiGN-SSM: open source parallel software for estimating gene networks with state space models.
Bioinformatics, 2011

2010
Design of Self-Oscillating Gels and Application to Biomimetic Actuators.
Sensors, 2010

Bayesian Learning in Sparse Graphical Factor Models via Variational Mean-Field Annealing.
Journal of Machine Learning Research, 2010

Bayesian experts in exploring reaction kinetics of transcription circuits.
Bioinformatics, 2010

Implementation of Sequential Importance Sampling in GPGPU.
Proceedings of the 13th Conference on Information Fusion, 2010

Discovering functional gene pathways associated with cancer heterogeneity via sparse supervised learning.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

2009
Parameter Estimation of In Silico Biological Pathways with Particle Filtering Towards a Petascale Computing.
Proceedings of the Biocomputing 2009: Proceedings of the Pacific Symposium, 2009

Chemical robot-design of peristaltic polymer gel actuator-.
Proceedings of the 2009 IEEE/RSJ International Conference on Intelligent Robots and Systems, 2009

Development of novel self-oscillating molecular robot fueled by organic acid.
Proceedings of the 2009 IEEE/RSJ International Conference on Intelligent Robots and Systems, 2009

2008
ExonMiner: Web service for analysis of GeneChip Exon array data.
BMC Bioinformatics, 2008

Bayesian learning of biological pathways on genomic data assimilation.
Bioinformatics, 2008

Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models.
Bioinformatics, 2008

Self-Oscillating Gel Actuator for Chemical Robotics.
Advanced Robotics, 2008

A New Cell Phone Remote Control for People with Visual Impairment.
Proceedings of the Computers Helping People with Special Needs, 2008

Analyzing Time Course Gene Expression Data with Biological and Technical Replicates to Estimate Gene Networks by State Space Models.
Proceedings of the Second Asia International Conference on Modelling and Simulation, 2008

2007
Statistical Absolute Evaluation of Gene Ontology Terms with Gene Expression Data.
Proceedings of the Bioinformatics Research and Applications, Third International Symposium, 2007

Chemical robot - Design of self-walking gel.
Proceedings of the 2007 IEEE/RSJ International Conference on Intelligent Robots and Systems, October 29, 2007

Computational Genome-Wide Discovery of Aberrant Splice Variations with Exon Expression Profiles.
Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

2006
ArrayCluster: an analytic tool for clustering, data visualization and module finder on gene expression profiles.
Bioinformatics, 2006

Prototyping and Evaluation of New Remote Controls for People with Visual Impairment.
Proceedings of the Computers Helping People with Special Needs, 2006

2005
A Penalized Likelihood Estimation on Transcriptional Module-Based Clustering.
Proceedings of the Computational Science and Its Applications, 2005

Estimating Time-Dependent Gene Networks from Time Series Microarray Data by Dynamic Linear Models with Markov Switching.
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, 2005

2004
Design of chemo-mechanical actuator using self-oscillating gel.
Proceedings of the 2004 IEEE International Conference on Robotics and Biomimetics, 2004

A Mixed Factors Model for Dimension Reduction and Extraction of a Group Structure in Gene Expression Data.
Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004

2000
3D web environment for knowledge management.
Future Generation Comp. Syst., 2000

1996
Integrated medical-image system for cancer research and treatment.
IBM Journal of Research and Development, 1996

1993
Clinical planning support system-CliPSS.
IEEE Computer Graphics and Applications, 1993


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