Pingkun Yan

Orcid: 0000-0002-9779-2141

Affiliations:
  • Rensselaer Polytechnic Institute, Department of Biomedical Engineering, Troy, NY, USA
  • Philips Research North America, Bethesda, MD, USA (former)
  • University of Central Florida, Orlando, USA (2005 - 2007)
  • National University of Singapore, Singapore (PhD 2006)


According to our database1, Pingkun Yan authored at least 178 papers between 2004 and 2024.

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Bibliography

2024
Flipover outperforms dropout in deep learning.
Vis. Comput. Ind. Biomed. Art, December, 2024

General Purpose Image Encoder DINOv2 for Medical Image Registration.
CoRR, 2024

Multimodal Neurodegenerative Disease Subtyping Explained by ChatGPT.
CoRR, 2024

2023
Federated Multi-Organ Segmentation With Inconsistent Labels.
IEEE Trans. Medical Imaging, October, 2023

Shape description losses for medical image segmentation.
Mach. Vis. Appl., July, 2023

Ultrasound Volume Reconstruction From Freehand Scans Without Tracking.
IEEE Trans. Biomed. Eng., March, 2023

Toward Adversarial Robustness in Unlabeled Target Domains.
IEEE Trans. Image Process., 2023

Evaluating Large Language Models for Radiology Natural Language Processing.
CoRR, 2023

Fact-Checking of AI-Generated Reports.
Proceedings of the Machine Learning in Medical Imaging - 14th International Workshop, 2023

Distance map supervised landmark localization for MR-TRUS registration.
Proceedings of the Medical Imaging 2023: Image Processing, 2023

Computer vision-based bronchoscope tracking and navigation tool.
Proceedings of the Medical Imaging 2023: Image-Guided Procedures, 2023

Federated Cross Learning for Medical Image Segmentation.
Proceedings of the Medical Imaging with Deep Learning, 2023

Spectral Adversarial MixUp for Few-Shot Unsupervised Domain Adaptation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Spatiotemporal Incremental Mechanics Modeling of Facial Tissue Change.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

Soft-Tissue Driven Craniomaxillofacial Surgical Planning.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

When Neural Networks Fail to Generalize? A Model Sensitivity Perspective.
Proceedings of the Thirty-Seventh AAAI Conference on Artificial Intelligence, 2023

2022
Development of metaverse for intelligent healthcare.
Nat. Mac. Intell., November, 2022

Shadow-Consistent Semi-Supervised Learning for Prostate Ultrasound Segmentation.
IEEE Trans. Medical Imaging, 2022

On a Sparse Shortcut Topology of Artificial Neural Networks.
IEEE Trans. Artif. Intell., 2022

Stabilizing deep tomographic reconstruction: Part B. Convergence analysis and adversarial attacks.
Patterns, 2022

Stabilizing deep tomographic reconstruction: Part A. Hybrid framework and experimental results.
Patterns, 2022

Polar transform network for prostate ultrasound segmentation with uncertainty estimation.
Medical Image Anal., 2022

Cross-modal attention for multi-modal image registration.
Medical Image Anal., 2022

OASIS: One-pass aligned atlas set for medical image segmentation.
Neurocomputing, 2022

Federated Multi-organ Segmentation with Partially Labeled Data.
CoRR, 2022

X-ray Dissectography Improves Lung Nodule Detection.
CoRR, 2022

Deep learning for biomechanical modeling of facial tissue deformation in orthognathic surgical planning.
Int. J. Comput. Assist. Radiol. Surg., 2022

Transformed Grid Distance Loss for Supervised Image Registration.
Proceedings of the Biomedical Image Registration - 10th International Workshop, 2022

Overlooked Trustworthiness of Saliency Maps.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

Deep Learning-Based Facial Appearance Simulation Driven by Surgically Planned Craniomaxillofacial Bony Movement.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

Regression Metric Loss: Learning a Semantic Representation Space for Medical Images.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

Genomics transformer for diagnosing Parkinson's disease.
Proceedings of the IEEE-EMBS International Conference on Biomedical and Health Informatics, 2022

Connectome transformer with anatomically inspired attention for Parkinson's diagnosis.
Proceedings of the BCB '22: 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, Northbrook, Illinois, USA, August 7, 2022

2021
Multi-Task Learning for Registering Images With Large Deformation.
IEEE J. Biomed. Health Informatics, 2021

Functional Brain Imaging Reliably Predicts Bimanual Motor Skill Performance in a Standardized Surgical Task.
IEEE Trans. Biomed. Eng., 2021

Integrative analysis for COVID-19 patient outcome prediction.
Medical Image Anal., 2021

Deep Neural Networks for the Assessment of Surgical Skills: A Systematic Review.
CoRR, 2021

Noise Entangled GAN For Low-Dose CT Simulation.
CoRR, 2021

Association of AI quantified COVID-19 chest CT and patient outcome.
Int. J. Comput. Assist. Radiol. Surg., 2021

Task-Oriented Low-Dose CT Image Denoising.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Cross-Modal Attention for MRI and Ultrasound Volume Registration.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Cardiovascular Disease Risk Improves COVID-19 Patient Outcome Prediction.
Proceedings of the Machine Learning in Medical Imaging - 12th International Workshop, 2021

End-to-end Ultrasound Frame to Volume Registration.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

AnaXNet: Anatomy Aware Multi-label Finding Classification in Chest X-Ray.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Transducer Adaptive Ultrasound Volume Reconstruction.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

T2 Mapping Refined Finite Element Modeling to Predict Knee Osteoarthritis Progression.
Proceedings of the 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society, 2021

2020
Boundary-Weighted Domain Adaptive Neural Network for Prostate MR Image Segmentation.
IEEE Trans. Medical Imaging, 2020

Multi-Organ Segmentation Over Partially Labeled Datasets With Multi-Scale Feature Abstraction.
IEEE Trans. Medical Imaging, 2020

Knowledge-Based Analysis for Mortality Prediction From CT Images.
IEEE J. Biomed. Health Informatics, 2020

Deep learning in medical image registration: a survey.
Mach. Vis. Appl., 2020

Synergizing medical imaging and radiotherapy with deep learning.
Mach. Learn. Sci. Technol., 2020

Robustified Domain Adaptation.
CoRR, 2020

Deep Learning Predicts Cardiovascular Disease Risks from Lung Cancer Screening Low Dose Computed Tomography.
CoRR, 2020

Stabilizing Deep Tomographic Reconstruction Networks.
CoRR, 2020

Self-supervised Training of Graph Convolutional Networks.
CoRR, 2020

Deep adaptive registration of multi-modal prostate images.
Comput. Medical Imaging Graph., 2020

Deep learning-based liver segmentation for fusion-guided intervention.
Int. J. Comput. Assist. Radiol. Surg., 2020

Unified multi-scale feature abstraction for medical image segmentation.
Proceedings of the Medical Imaging 2020: Image Processing, 2020

Sensorless Freehand 3D Ultrasound Reconstruction via Deep Contextual Learning.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Division and Fusion: Rethink Convolutional Kernels for 3D Medical Image Segmentation.
Proceedings of the Machine Learning in Medical Imaging - 11th International Workshop, 2020

Multi-task learning for mortality prediction in LDCT images.
Proceedings of the Medical Imaging 2020: Computer-Aided Diagnosis, 2020

Unsupervised Domain Adaptation with Dual-Scheme Fusion Network for Medical Image Segmentation.
Proceedings of the Twenty-Ninth International Joint Conference on Artificial Intelligence, 2020

2019
MR Image Super-Resolution via Wide Residual Networks With Fixed Skip Connection.
IEEE J. Biomed. Health Informatics, 2019

OASIS: One-pass aligned Atlas Set for Image Segmentation.
CoRR, 2019

Multi-hop Convolutions on Weighted Graphs.
CoRR, 2019

Deep neural maps for unsupervised visualization of high-grade cancer in prostate biopsies.
Int. J. Comput. Assist. Radiol. Surg., 2019

Learning deep similarity metric for 3D MR-TRUS image registration.
Int. J. Comput. Assist. Radiol. Surg., 2019

Reinforced Transformer for Medical Image Captioning.
Proceedings of the Machine Learning in Medical Imaging - 10th International Workshop, 2019

A shell and kernel descriptor based joint deep learning model for predicting breast lesion malignancy.
Proceedings of the Medical Imaging 2019: Computer-Aided Diagnosis, 2019

Feature Fusion Encoder Decoder Network for Automatic Liver Lesion Segmentation.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019

PASiam: Predicting Attention Inspired Siamese Network, for Space-Borne Satellite Video Tracking.
Proceedings of the IEEE International Conference on Multimedia and Expo, 2019

Hybrid Neural Networks for Mortality Prediction from LDCT Images.
Proceedings of the 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2019

Generative Low-Dose CT Image Denoising.
Proceedings of the Deep Learning and Convolutional Neural Networks for Medical Imaging and Clinical Informatics, 2019

2018
Low-Dose CT Image Denoising Using a Generative Adversarial Network With Wasserstein Distance and Perceptual Loss.
IEEE Trans. Medical Imaging, 2018

Deep Recurrent Neural Networks for Prostate Cancer Detection: Analysis of Temporal Enhanced Ultrasound.
IEEE Trans. Medical Imaging, 2018

Correlation-Based Tracking of Multiple Targets With Hierarchical Layered Structure.
IEEE Trans. Cybern., 2018

Shape prior constrained PSO model for bladder wall MRI segmentation.
Neurocomputing, 2018

Hybrid deep neural networks for all-cause Mortality Prediction from LDCT Images.
CoRR, 2018

Learning Deep Similarity Metric for 3D MR-TRUS Registration.
CoRR, 2018

Exploiting Interslice Correlation for MRI Prostate Image Segmentation, from Recursive Neural Networks Aspect.
Complex., 2018

Toward a real-time system for temporal enhanced ultrasound-guided prostate biopsy.
Int. J. Comput. Assist. Radiol. Surg., 2018

Adversarial Image Registration with Application for MR and TRUS Image Fusion.
Proceedings of the Machine Learning in Medical Imaging - 9th International Workshop, 2018

Learning from Noisy Label Statistics: Detecting High Grade Prostate Cancer in Ultrasound Guided Biopsy.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Deep compressive macroscopic fluorescence lifetime imaging.
Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018

A Deep Learning Health Data Analysis Approach: Automatic 3D Prostate MR Segmentation with Densely-Connected Volumetric ConvNets.
Proceedings of the 2018 International Joint Conference on Neural Networks, 2018

2017
Low Dose CT Image Denoising Using a Generative Adversarial Network with Wasserstein Distance and Perceptual Loss.
CoRR, 2017

CT Image Denoising with Perceptive Deep Neural Networks.
CoRR, 2017

Transfer learning from RF to B-mode temporal enhanced ultrasound features for prostate cancer detection.
Int. J. Comput. Assist. Radiol. Surg., 2017

Detection and grading of prostate cancer using temporal enhanced ultrasound: combining deep neural networks and tissue mimicking simulations.
Int. J. Comput. Assist. Radiol. Surg., 2017

Deeply-supervised CNN for prostate segmentation.
Proceedings of the 2017 International Joint Conference on Neural Networks, 2017

2016
Classifying Cancer Grades Using Temporal Ultrasound for Transrectal Prostate Biopsy.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

2015
Label Image Constrained Multiatlas Selection.
IEEE Trans. Cybern., 2015

Partial sparse shape constrained sector-driven bladder wall segmentation.
Mach. Vis. Appl., 2015

Feature competition and partial sparse shape modeling for cardiac image sequences segmentation.
Neurocomputing, 2015

Machine learning in medical imaging.
Comput. Medical Imaging Graph., 2015

Surface-based registration of liver in ultrasound and CT.
Proceedings of the Medical Imaging 2015: Image-Guided Procedures, 2015

2014
Adaptive Shape Prior Constrained Level Sets for Bladder MR Image Segmentation.
IEEE J. Biomed. Health Informatics, 2014

Alternatively Constrained Dictionary Learning For Image Superresolution.
IEEE Trans. Cybern., 2014

Pylon line spatial correlation assisted transmission line detection.
IEEE Trans. Aerosp. Electron. Syst., 2014

Object-aware power line detection using color and near-infrared images.
IEEE Trans. Aerosp. Electron. Syst., 2014

Guest Editorial: Special issue on advanced computing for image-guided intervention.
Neurocomputing, 2014

Ego motion guided particle filter for vehicle tracking in airborne videos.
Neurocomputing, 2014

Hierarchical incorporation of shape and shape dynamics for flying bird detection.
Neurocomputing, 2014

Ultrasound-Based Predication of Prostate Cancer in MRI-guided Biopsy.
Proceedings of the Clinical Image-Based Procedures. Translational Research in Medical Imaging, 2014

2013
Manifold Regularized Sparse NMF for Hyperspectral Unmixing.
IEEE Trans. Geosci. Remote. Sens., 2013

Learning Saliency by MRF and Differential Threshold.
IEEE Trans. Cybern., 2013

Saliency Detection by Multiple-Instance Learning.
IEEE Trans. Cybern., 2013

Visual Saliency by Selective Contrast.
IEEE Trans. Circuits Syst. Video Technol., 2013

Image Super-Resolution Via Double Sparsity Regularized Manifold Learning.
IEEE Trans. Circuits Syst. Video Technol., 2013

Prostate Segmentation in MR Images Using Discriminant Boundary Features.
IEEE Trans. Biomed. Eng., 2013

Multi-spectral saliency detection.
Pattern Recognit. Lett., 2013

Robust visual tracking with discriminative sparse learning.
Pattern Recognit., 2013

Greedy regression in sparse coding space for single-image super-resolution.
J. Vis. Commun. Image Represent., 2013

SIFT on manifold: An intrinsic description.
Neurocomputing, 2013

Special issue: Behaviours in video.
Neurocomputing, 2013

Image registration by normalized mapping.
Neurocomputing, 2013

Sparse coding for image denoising using spike and slab prior.
Neurocomputing, 2013

Transfer learning for pedestrian detection.
Neurocomputing, 2013

Pedestrian detection in unseen scenes by dynamically updating visual words.
Neurocomputing, 2013

Tracking vehicles as groups in airborne videos.
Neurocomputing, 2013

Global structure constrained local shape prior estimation for medical image segmentation.
Comput. Vis. Image Underst., 2013

2012
Robust Alternative Minimization for Matrix Completion.
IEEE Trans. Syst. Man Cybern. Part B, 2012

Selecting Key Poses on Manifold for Pairwise Action Recognition.
IEEE Trans. Ind. Informatics, 2012

Visual Attention Accelerated Vehicle Detection in Low-Altitude Airborne Video of Urban Environment.
IEEE Trans. Circuits Syst. Video Technol., 2012

Vehicle detection and tracking in airborne videos by multi-motion layer analysis.
Mach. Vis. Appl., 2012

Machine Learning in Medical Imaging.
Int. J. Biomed. Imaging, 2012

Confidence guided enhancing brain tumor segmentation in multi-parametric MRI.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Coupled Directional Level Set for MR Image Segmentation.
Proceedings of the 11th International Conference on Machine Learning and Applications, 2012

Multi-atlas Based Image Selection with Label Image Constraint.
Proceedings of the 11th International Conference on Machine Learning and Applications, 2012

Geometry constrained sparse coding for single image super-resolution.
Proceedings of the 2012 IEEE Conference on Computer Vision and Pattern Recognition, 2012

2011
Vehicle Detection and Motion Analysis in Low-Altitude Airborne Video Under Urban Environment.
IEEE Trans. Circuits Syst. Video Technol., 2011

Adaptively Learning Local Shape Statistics for Prostate Segmentation in Ultrasound.
IEEE Trans. Biomed. Eng., 2011

Single-image super-resolution via local learning.
Int. J. Mach. Learn. Cybern., 2011

Rapid pedestrian detection in unseen scenes.
Neurocomputing, 2011

Biopsy needle detection in transrectal ultrasound.
Comput. Medical Imaging Graph., 2011

Local semi-supervised regression for single-image super-resolution.
Proceedings of the IEEE 13th International Workshop on Multimedia Signal Processing (MMSP 2011), 2011

Local learning-based image super-resolution.
Proceedings of the IEEE 13th International Workshop on Multimedia Signal Processing (MMSP 2011), 2011

Collaborative Kalman filters for vehicle tracking.
Proceedings of the 2011 IEEE International Workshop on Machine Learning for Signal Processing, 2011

Putting poses on manifold for action recognition.
Proceedings of the 2011 IEEE International Workshop on Machine Learning for Signal Processing, 2011

Segmenting Images by Combining Selected Atlases on Manifold.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

Estimating patient-specific shape prior for medical image segmentation.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

Learning shape statistics for hierarchical 3D medical image segmentation.
Proceedings of the 18th IEEE International Conference on Image Processing, 2011

Robust color correction in stereo vision.
Proceedings of the 18th IEEE International Conference on Image Processing, 2011

A novel alternative algorithm for limited angle tomography.
Proceedings of the 18th IEEE International Conference on Image Processing, 2011

Putting images on a manifold for atlas-based image segmentation.
Proceedings of the 18th IEEE International Conference on Image Processing, 2011

Linear SVM classification using boosting HOG features for vehicle detection in low-altitude airborne videos.
Proceedings of the 18th IEEE International Conference on Image Processing, 2011

Single-Image Super-Resolution via Sparse Coding Regression.
Proceedings of the Sixth International Conference on Image and Graphics, 2011

KLT Feature Based Vehicle Detection and Tracking in Airborne Videos.
Proceedings of the Sixth International Conference on Image and Graphics, 2011

Accelerating Vehicle Detection in Low-Altitude Airborne Urban Video.
Proceedings of the Sixth International Conference on Image and Graphics, 2011

Medical Image Segmentation Using Descriptive Image Features.
Proceedings of the British Machine Vision Conference, 2011

Image Denoising via Improved Sparse Coding.
Proceedings of the British Machine Vision Conference, 2011

Target-oriented shape modeling with structure constraint for image segmentation.
Proceedings of the First Asian Conference on Pattern Recognition, 2011

Designing and selecting features for MR image segmentation.
Proceedings of the First Asian Conference on Pattern Recognition, 2011

Image denoising via weight regression.
Proceedings of the First Asian Conference on Pattern Recognition, 2011

Local adaptive dictionary based image denoising.
Proceedings of the First Asian Conference on Pattern Recognition, 2011

Single-image super-resolution based on semi-supervised learning.
Proceedings of the First Asian Conference on Pattern Recognition, 2011

Utilizing homotopy for single image superresolution.
Proceedings of the First Asian Conference on Pattern Recognition, 2011

2010
Discrete Deformable Model Guided by Partial Active Shape Model for TRUS Image Segmentation.
IEEE Trans. Biomed. Eng., 2010

Segmenting TRUS video sequences using local shape statistics.
Proceedings of the Medical Imaging 2010: Visualization, 2010

Multi-parametric MRI-pathologic correlation of prostate cancer using tracked biopsies.
Proceedings of the Medical Imaging 2010: Visualization, 2010

Incremental Shape Statistics Learning for Prostate Tracking in TRUS.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2010

Realtime TRUS/MRI Fusion Targeted-Biopsy for Prostate Cancer: A Clinical Demonstration of Increased Positive Biopsy Rates.
Proceedings of the Prostate Cancer Imaging. Computer-Aided Diagnosis, 2010

2009
Modeling Interaction for Segmentation of Neighboring Structures.
IEEE Trans. Inf. Technol. Biomed., 2009

Optimal search guided by partial active shape model for prostate segmentation in TRUS images.
Proceedings of the Medical Imaging 2009: Visualization, 2009

2008
Medical Image Processing.
Proceedings of the Wiley Encyclopedia of Computer Science and Engineering, 2008

Automatic Segmentation of High-Throughput RNAi Fluorescent Cellular Images.
IEEE Trans. Inf. Technol. Biomed., 2008

Action recognition using spatio-temporal regularity based features.
Proceedings of the IEEE International Conference on Acoustics, 2008

Learning 4D action feature models for arbitrary view action recognition.
Proceedings of the 2008 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR 2008), 2008

2007
Spatio-Temporal Regularity Flow (SPREF): Its Estimation and Applications.
IEEE Trans. Circuits Syst. Video Technol., 2007

3D Model based Object Class Detection in An Arbitrary View.
Proceedings of the IEEE 11th International Conference on Computer Vision, 2007

A Homographic Framework for the Fusion of Multi-view Silhouettes.
Proceedings of the IEEE 11th International Conference on Computer Vision, 2007

2006
Medical Image Segmentation Using Minimal Path Deformable Models With Implicit Shape Priors.
IEEE Trans. Inf. Technol. Biomed., 2006

Segmentation of volumetric MRA images by using capillary active contour.
Medical Image Anal., 2006

Segmentation of Neighboring Structures by Modeling Their Interaction.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2006

2005
Motion compensated lossy-to-lossless compression of 4-D medical images using integer wavelet transforms.
IEEE Trans. Inf. Technol. Biomed., 2005

Segmentation of Neighboring Organs in Medical Image with Model Competition.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

MRA Image Segmentation with Capillary Active Contour.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

2004
Medical image segmentation with minimal path deformable models.
Proceedings of the 2004 International Conference on Image Processing, 2004


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