Polina Shpilker

According to our database, Polina Shpilker authored at least 9 papers between 2021 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2025

Automatic Metadata Capture and Processing for High-Performance Workflows.

Polina Shpilker, Line Pouchard

CoRR, June, 2025

Decoding the Functional Interactome of Non-model Organisms with PHILHARMONIC.

Samuel Sledzieski, Charlotte Versavel, Rohit Singh, Faith Ocitti, Kapil Devkota, Lokender Kumar, Polina Shpilker, Liza Roger, Jinkyu Yang, Nastassja Lewinski, Hollie Putnam, Bonnie Berger, Judith Klein-Seetharaman, Lenore Cowen

Proceedings of the Research in Computational Molecular Biology, 2025

2024

Cross-Referencing Metadata Through an Extension of the MEDFORD Language.

Polina Shpilker, Benjamin Stubbs, Michael Sayers, Lenore Cowen, Shaun Wallace, Alva L. Couch, Noah M. Daniels

Proceedings of the Metadata and Semantic Research - 18th Research Conference, 2024

AnVILMEDFORD: Documenting Cloud-Based Analysis Projects Using the MEDFORD Metadata Language.

Benjamin Stubbs, Polina Shpilker, Michael Sayers, Shaun Wallace, Noah M. Daniels, Alva L. Couch

Proceedings of the IEEE International Conference on Big Data, 2024

2023

Analyzing histone ChIP-seq data with a bin-based probability of being signal.

Vivian Hecht, Kevin Dong, Sreshtaa Rajesh, Polina Shpilker, Siddarth Wekhande, Noam Shoresh

PLoS Comput. Biol., October, 2023

Context-Sensitive Editing for the MEDFORD Metadata Language.

Liam Strand, Andrew Powers, Polina Shpilker, Lenore Cowen, Alva L. Couch, Noah M. Daniels

Proceedings of the Metadata and Semantic Research - 17th Research Conference, 2023

Building the I (Interoperability) of FAIR for Performance Reproducibility of Large-Scale Composable Workflows in RECUP.

Bogdan Nicolae, Tanzima Z. Islam, Robert B. Ross, Huub J. J. Van Dam, Kevin Assogba, Polina Shpilker, Mikhail Titov, Matteo Turilli, Tianle Wang, Ozgur O. Kilic, Shantenu Jha, Line C. Pouchard

Proceedings of the 19th IEEE International Conference on e-Science, 2023

2022

MEDFORD: A human- and machine-readable metadata markup language.

Polina Shpilker, John Freeman, Hailey McKelvie, Jill Ashey, Jay-Miguel Fonticella, Hollie Putnam, Jane Greenberg, Lenore Cowen, Alva L. Couch, Noah M. Daniels

Database J. Biol. Databases Curation, 2022

2021

MEtaData Format for Open Reef Data (MEDFORD).

Polina Shpilker, John Freeman, Hailey McKelvie, Jill Ashey, Jay-Miguel Fonticella, Hollie Putnam, Jane Greenberg, Lenore Cowen, Alva L. Couch, Noah M. Daniels

Proceedings of the Metadata and Semantic Research - 15th International Conference, 2021