Roeland Merks

According to our database, Roeland Merks authored at least 20 papers between 2002 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

The shapes of elongating gastruloids are consistent with convergent extension driven by a combination of active cell crawling and differential adhesion.

Martijn A. de Jong, Esmée Adegeest, Noémie M. L. P. Bérenger-Currias, Maria Mircea, Roeland M. H. Merks, Stefan Semrau

PLoS Comput. Biol., February, 2024

2023

A new model of Notch signalling: Control of Notch receptor cis-inhibition via Notch ligand dimers.

Daipeng Chen, Zary Forghany, Xinxin Liu, Haijiang Wang, Roeland M. H. Merks, David A. Baker

PLoS Comput. Biol., January, 2023

2022

Computational modelling of cell motility modes emerging from cell-matrix adhesion dynamics.

Leonie van Steijn, Inge M. N. Wortel, Clément Sire, Loïc Dupré, Guy Theraulaz, Roeland M. H. Merks

PLoS Comput. Biol., 2022

2018

A local uPAR-plasmin-TGFβ1 positive feedback loop in a qualitative computational model of angiogenic sprouting explains the in vitro effect of fibrinogen variants.

Sonja E. M. Boas, Joao Carvalho, Marloes van den Broek, Ester M. Weijers, Marie-José Goumans, Pieter Koolwijk, Roeland M. H. Merks

PLoS Comput. Biol., 2018

2017

Blood vessel tortuosity selects against evolution of aggressive tumor cells in confined tissue environments: A modeling approach.

András Szabó, Roeland M. H. Merks

PLoS Comput. Biol., 2017

Emergence of microbial diversity due to cross-feeding interactions in a spatial model of gut microbial metabolism.

Milan J. A. van Hoek, Roeland M. H. Merks

BMC Syst. Biol., 2017

2016

Modelling the Growth of Blood Vessels in Health and Disease.

Elisabeth G. Rens, Sonja E. M. Boas, Roeland M. H. Merks

ERCIM News, 2016

Tackling Big Data in the Life Sciences - Introduction to the Special Theme.

Roeland Merks, Marie-France Sagot

ERCIM News, 2016

2015

Tip cell overtaking occurs as a side effect of sprouting in computational models of angiogenesis.

Sonja E. M. Boas, Roeland M. H. Merks

BMC Syst. Biol., 2015

A global sensitivity analysis approach for morphogenesis models.

Sonja E. M. Boas, María I. Navarro Jimenez, Roeland M. H. Merks, Joke G. Blom

BMC Syst. Biol., 2015

2014

Mechanical Cell-Matrix Feedback Explains Pairwise and Collective Endothelial Cell Behavior In Vitro.

René F. M. van Oers, Elisabeth G. Rens, Danielle J. LaValley, Cynthia A. Reinhart-King, Roeland M. H. Merks

PLoS Comput. Biol., 2014

The Next Boom of Big Data in Biology: Multicellular Datasets.

Roeland Merks

ERCIM News, 2014

2012

Redox balance is key to explaining full vs. partial switching to low-yield metabolism.

Milan van Hoek, Roeland Merks

BMC Syst. Biol., 2012

2011

A Web-based Repository of Reproducible Simulation Experiments for Systems Biology.

Michael A. Guravage, Roeland Merks

Proceedings of the SIMULTECH 2011 - Proceedings of 1st International Conference on Simulation and Modeling Methodologies, Technologies and Applications, Noordwijkerhout, The Netherlands, 29, 2011

2008

Contact-Inhibited Chemotaxis in De Novo and Sprouting Blood-Vessel Growth.

Roeland Merks, Erica D. Perryn, Abbas Shirinifard, James A. Glazier

PLoS Comput. Biol., 2008

2007

From Genes to Organisms Via the Cell: A Problem-Solving Environment for Multicellular Development.

Trevor M. Cickovski, Kedar Aras, Maciej Swat, Roeland Merks, Tilmann Glimm, H. George E. Hentschel, Mark S. Alber, James A. Glazier, Stuart A. Newman, Jesús A. Izaguirre

Comput. Sci. Eng., 2007

2006

Problem-Solving Environments for Biological Morphogenesis.

Roeland Merks, Alfons G. Hoekstra, Jaap A. Kaandorp, Peter M. A. Sloot, Paulien Hogeweg

Comput. Sci. Eng., 2006

2004

Cell-Oriented Modeling of In Vitro Capillary Development.

Roeland Merks, Stuart A. Newman, James A. Glazier

Proceedings of the Cellular Automata, 2004

2003

A Problem Solving Environment for Modelling Stony Coral Morphogenesis.

Roeland Merks, Alfons G. Hoekstra, Jaap A. Kaandorp, Peter M. A. Sloot

Proceedings of the Computational Science - ICCS 2003, 2003

2002

Spontaneous Branching in a Polyp Oriented Model of Stony Coral Growth.

Roeland Merks, Alfons G. Hoekstra, Jaap A. Kaandorp, Peter M. A. Sloot

Proceedings of the Computational Science - ICCS 2002, 2002