Alfons G. Hoekstra

Orcid: 0000-0002-3955-2449

According to our database1, Alfons G. Hoekstra authored at least 91 papers between 1994 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
Data-driven reduced-order modelling for blood flow simulations with geometry-informed snapshots.
J. Comput. Phys., January, 2024

2023
Exploring the potential impact of multi-factor precision interventions in Alzheimer's disease with system dynamics.
J. Biomed. Informatics, September, 2023

Image-based flow simulation of platelet aggregates under different shear rates.
PLoS Comput. Biol., 2023

In silico thrombectomy trials for acute ischemic stroke.
Comput. Methods Programs Biomed., 2023

2022
Building a Fine-Grained Analytical Performance Model for Complex Scientific Simulations.
Proceedings of the Parallel Processing and Applied Mathematics, 2022

2021
Non-intrusive and semi-intrusive uncertainty quantification of a multiscale in-stent restenosis model.
Reliab. Eng. Syst. Saf., 2021

Tutorial applications for Verification, Validation and Uncertainty Quantification using VECMA toolkit.
J. Comput. Sci., 2021

Uncertainty quantification of a 3D In-Stent Restenosis model with surrogate modelling.
CoRR, 2021

In silico trials for treatment of acute ischemic stroke: Design and implementation.
Comput. Biol. Medicine, 2021

Two-Way Coupling Between 1D Blood Flow and 3D Tissue Perfusion Models.
Proceedings of the Computational Science - ICCS 2021, 2021

Uncertainty Quantification of Coupled 1D Arterial Blood Flow and 3D Tissue Perfusion Models Using the INSIST Framework.
Proceedings of the Computational Science - ICCS 2021, 2021

des-ist: A Simulation Framework to Streamline Event-Based In Silico Trials.
Proceedings of the Computational Science - ICCS 2021, 2021

2020
The influence of red blood cell deformability on hematocrit profiles and platelet margination.
PLoS Comput. Biol., 2020

Sensitivity analysis based dimension reduction of multiscale models.
Math. Comput. Simul., 2020

Easing Multiscale Model Design and Coupling with MUSCLE 3.
Proceedings of the Computational Science - ICCS 2020, 2020

A Heterogeneous Multi-scale Model for Blood Flow.
Proceedings of the Computational Science - ICCS 2020, 2020

2019
Towards Heterogeneous Multi-scale Computing on Large Scale Parallel Supercomputers.
Supercomput. Front. Innov., 2019

Semi-intrusive uncertainty propagation for multiscale models.
J. Comput. Sci., 2019

Patterns for High Performance Multiscale Computing.
Future Gener. Comput. Syst., 2019

Optimizing Parallel Performance of the Cell Based Blood Flow Simulation Software HemoCell.
Proceedings of the Computational Science - ICCS 2019, 2019

2018
The Virtual Physiological Human Conference 2016.
J. Comput. Sci., 2018

Load balancing of parallel cell-based blood flow simulations.
J. Comput. Sci., 2018

How will Your Digital Twin be Born?
ERCIM News, 2018

Information Processing Features Can Detect Behavioral Regimes of Dynamical Systems.
Complex., 2018

2017
Multiscale computing in the exascale era.
J. Comput. Sci., 2017

Uncertainty quantification and sensitivity analysis applied to the wind wave model SWAN.
Environ. Model. Softw., 2017

Hemocell: a high-performance microscopic cellular library.
Proceedings of the International Conference on Computational Science, 2017

Multiscale Modelling and Simulation, 14th International Workshop.
Proceedings of the International Conference on Computational Science, 2017

2016
Partitioning of Arterial Tree for Parallel Decomposition of Hemodynamic Calculations.
Proceedings of the International Conference on Computational Science 2016, 2016

Multiscale Modelling and Simulation, 13th International Workshop.
Proceedings of the International Conference on Computational Science 2016, 2016

2015
Parallel performance of an IB-LBM suspension simulation framework.
J. Comput. Sci., 2015

Information geometric analysis of phase transitions in complex patterns: the case of the Gray-Scott reaction-diffusion model.
CoRR, 2015

Fluid Simulations with Atomistic Resolution: Multiscale Model with Account of Nonlocal Momentum Transfer.
Proceedings of the International Conference on Computational Science, 2015

Multiscale Modelling and Simulation Workshop: 12 Years of Inspiration.
Proceedings of the International Conference on Computational Science, 2015

2014
Distributed multiscale computing with MUSCLE 2, the Multiscale Coupling Library and Environment.
J. Comput. Sci., 2014

2013
Foundations of distributed multiscale computing: Formalization, specification, and analysis.
J. Parallel Distributed Comput., 2013

Multiscale Computing with the Multiscale Modeling Library and Runtime Environment.
Proceedings of the International Conference on Computational Science, 2013

2012
A Distributed Multiscale Computation of a Tightly Coupled Model Using the Multiscale Modeling Language.
Proceedings of the International Conference on Computational Science, 2012

Flexible composition and execution of high performance, high fidelity multiscale biomedical simulations
CoRR, 2012

2011
Heterogeneous Multiscale Simulations of Suspension Flow.
Multiscale Model. Simul., 2011

A Complex Automata approach for in-stent restenosis: Two-dimensional multiscale modelling and simulations.
J. Comput. Sci., 2011

Cellular Automata Simulations on a FPGA cluster.
Int. J. High Perform. Comput. Appl., 2011

A Framework for Multiscale and Multiscience Modeling and Numerical Simulations.
Proceedings of the Unconventional Computation - 10th International Conference, 2011

A Principled Approach to Distributed Multiscale Computing, from Formalization to Execution.
Proceedings of the IEEE 7th International Conference on E-Science, 2011

Towards Distributed Multiscale Simulation of Biological Processes.
Proceedings of the IEEE 7th International Conference on E-Science, 2011

2010
The influence of mitoses rate on growth dynamics of a cellular automata model of tumour growth.
Proceedings of the International Conference on Computational Science, 2010

MML: towards a Multiscale Modeling Language.
Proceedings of the International Conference on Computational Science, 2010

Mesoscopic methods in engineering and science.
Comput. Math. Appl., 2010

Multi-scale modelling in computational biomedicine.
Briefings Bioinform., 2010

Introduction to Modeling of Complex Systems Using Cellular Automata.
Proceedings of the Simulating Complex Systems by Cellular Automata, 2010

Complex Automata: Multi-scale Modeling with Coupled Cellular Automata.
Proceedings of the Simulating Complex Systems by Cellular Automata, 2010

2009
Compute Bound and I/O Bound Cellular Automata Simulations on FPGA Logic.
ACM Trans. Reconfigurable Technol. Syst., 2009


2008
Performance evaluation of a parallel sparse lattice Boltzmann solver.
J. Comput. Phys., 2008

Floating point based Cellular Automata simulations using a dual FPGA-enabled system.
Proceedings of the 2008 Second International Workshop on High-Performance Reconfigurable Computing Technology and Applications, 2008

Simulation of Multiphysics Multiscale Systems, 5th International Workshop.
Proceedings of the Computational Science, 2008

An Agent-Based Coupling Platform for Complex Automata.
Proceedings of the Computational Science, 2008

Scale-Splitting Error in Complex Automata Models for Reaction-Diffusion Systems.
Proceedings of the Computational Science, 2008

Multi-scale Modeling with Cellular Automata: The Complex Automata Approach.
Proceedings of the Cellular Automata, 2008

On the Collision-Propagation and Gather-Update Formulations of a Cellular Automata Rule.
Proceedings of the Cellular Automata, 2008

Error Investigations in Complex Automata Models for Reaction-Diffusion Systems.
Proceedings of the Cellular Automata, 2008

2007
Modeling Dynamic Systems with Cellular Automata.
Proceedings of the Handbook of Dynamic System Modeling., 2007

Towards Distributed Petascale Computing
CoRR, 2007

Towards a Complex Automata Framework for Multi-scale Modeling: Formalism and the Scale Separation Map.
Proceedings of the Computational Science, 2007

Performance Modeling of 2D Cellular Automata on FPGA.
Proceedings of the FPL 2007, 2007

2006
Problem-Solving Environments for Biological Morphogenesis.
Comput. Sci. Eng., 2006

2005
A Problem Solving Environment for Image-Based Computational Hemodynamics.
Proceedings of the Computational Science, 2005

Introducing Grid Speedup G: A Scalability Metric for Parallel Applications on the Grid.
Proceedings of the Advances in Grid Computing, 2005

2004
An integrative approach to high-performance biomedical problem solving environments on the Grid.
Parallel Comput., 2004

Unsteady flow in a 2D elastic tube with the LBGK method.
Future Gener. Comput. Syst., 2004

Computational science of lattice Boltzmann modelling.
Future Gener. Comput. Syst., 2004

Lattice BGK simulations of flow in a symmetric bifurcation.
Future Gener. Comput. Syst., 2004

Accuracy versus Performance in Lattice Boltzmann BGK Simulations of Systolic Flows.
Proceedings of the Computational Science, 2004

An interactive Grid for non-invasive vascular reconstruction.
Proceedings of the 4th IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGrid 2004), 2004

2003
A Problem Solving Environment for Modelling Stony Coral Morphogenesis.
Proceedings of the Computational Science - ICCS 2003, 2003

Lattice BGK Simulations of Unsteady Flow in a 2D Elastic Tube.
Proceedings of the Computational Science - ICCS 2003, 2003

Lattice Boltzmann, a Robust and Accurate Solver for Interactive Computational Hemodynamics.
Proceedings of the Computational Science - ICCS 2003, 2003

2002
Spontaneous Branching in a Polyp Oriented Model of Stony Coral Growth.
Proceedings of the Computational Science - ICCS 2002, 2002

Accuracy of 2D Pulsatile Flow in the Lattice Boltzmann BGK Method.
Proceedings of the Computational Science - ICCS 2002, 2002

2001
Iterative momentum relaxation for fast lattice-Boltzmann simulations.
Future Gener. Comput. Syst., 2001

Cellular Automata as a Mesoscopic Approach to Model and Simulate Complex Systems.
Proceedings of the Computational Science - ICCS 2001, 2001

2000
The Distributed ASCI Supercomputer Project.
ACM SIGOPS Oper. Syst. Rev., 2000

1999
Distributed Simulation with Cellular Automata: Architecture and Applications.
Proceedings of the SOFSEM '99, Theory and Practice of Informatics, 26th Conference on Current Trends in Theory and Practice of Informatics, Milovy, Czech Republic, November 27, 1999

Computational Aspects of Multi-Species Lattice-Gas Automata.
Proceedings of the High-Performance Computing and Networking, 7th International Conference, 1999

1998
High Performance Computing and Networking Europe 1997.
Future Gener. Comput. Syst., 1998

Memory Efficiency of Parallel Programs and Memory Bounded Speedup.
Proceedings of the High-Performance Computing and Networking, 1998

Parallel Latice-Boltzmann Simulation of Fluid Flow in Centrifugal Elutriation Chambers.
Proceedings of the High-Performance Computing and Networking, 1998

1997
High Performance Discrete Event Simulations to Evaluate Complex Industrial Systems.
Proceedings of the High-Performance Computing and Networking, 1997

1996
Native and generic parallel programming environments on a transputer and a PowerPC platform.
Concurr. Pract. Exp., 1996

Simulating Light Scattering from Micron-Sized Particles: A Parallel Fast Discrete Dipole Approximation.
Proceedings of the High-Performance Computing and Networking, 1996

1994
A Comparison of the Iserver-Occam, Parix, Express, and PVM Programming Environments on a Parsytec GCel.
Proceedings of the High-Performance Computing and Networking, 1994


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