Mark S. Alber
Orcid: 0000-0002-7153-1138Affiliations:
- University of California Riverside, CA, USA
- University of Notre Dame, IN, USA (former)
According to our database1,
Mark S. Alber
authored at least 39 papers
between 2001 and 2023.
Collaborative distances:
Collaborative distances:
Timeline
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Online presence:
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on zbmath.org
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on orcid.org
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Bibliography
2023
Learning Deformable 3D Graph Similarity to Track Plant Cells in Unregistered Time Lapse Images.
CoRR, 2023
2022
Combined computational modeling and experimental analysis integrating chemical and mechanical signals suggests possible mechanism of shoot meristem maintenance.
PLoS Comput. Biol., 2022
2021
Computational modeling of blood component transport related to coronary artery thrombosis in Kawasaki disease.
PLoS Comput. Biol., 2021
2020
Epithelial organ shape is generated by patterned actomyosin contractility and maintained by the extracellular matrix.
PLoS Comput. Biol., 2020
2019
Integrating machine learning and multiscale modeling - perspectives, challenges, and opportunities in the biological, biomedical, and behavioral sciences.
npj Digit. Medicine, 2019
2017
Multi-scale computational study of the mechanical regulation of cell mitotic rounding in epithelia.
PLoS Comput. Biol., 2017
2016
IEEE Trans. Medical Imaging, 2016
Combining Fully Convolutional and Recurrent Neural Networks for 3D Biomedical Image Segmentation.
Proceedings of the Advances in Neural Information Processing Systems 29: Annual Conference on Neural Information Processing Systems 2016, 2016
Segmentation and tracking of Pseudomonas aeruginosa for cell dynamics analysis in time-lapse images.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016
2015
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 - 18th International Conference Munich, Germany, October 5, 2015
2014
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, 2014
An Automated Approach for Fibrin Network Segmentation and Structure Identification in 3D Confocal Microscopy Images.
Proceedings of the 2014 IEEE 27th International Symposium on Computer-Based Medical Systems, 2014
2013
PLoS Comput. Biol., 2013
2012
PLoS Comput. Biol., 2012
Automatic segmentation and analysis of fibrin networks in 3D confocal microscopy images.
Proceedings of the Medical Imaging 2012: Image Processing, 2012
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012
2011
Identification and classification of cells in multispectral microscopy images of lymph nodes.
Proceedings of the Medical Imaging 2011: Image Processing, 2011
2010
Belief propagation estimation of protein and domain interactions using the sum-product algorithm.
IEEE Trans. Inf. Theory, 2010
Segmentation, Reconstruction, and Analysis of Blood Thrombus Formation in 3D 2-Photon Microscopy Images.
EURASIP J. Adv. Signal Process., 2010
Estimation of Protein and Domain Interactions in the Switching Motility System of Myxococcus Xanthus.
Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010
2009
Application of Discontinuous Galerkin Methods for Reaction-Diffusion Systems in Developmental Biology.
J. Sci. Comput., 2009
Existence of global solutions of a macroscopic model of cellular motion in a chemotactic field.
Appl. Math. Lett., 2009
Segmentation, reconstruction, and analysis of blood thrombi in 2-photon microscopy images.
Proceedings of the Twenty-Second IEEE International Symposium on Computer-Based Medical Systems, 2009
2007
PLoS Comput. Biol., 2007
From Genes to Organisms Via the Cell: A Problem-Solving Environment for Multicellular Development.
Comput. Sci. Eng., 2007
A parallel implementation of the Cellular Potts Model for simulation of cell-based morphogenesis.
Comput. Phys. Commun., 2007
Multiscale Agent-based Simulation for Chondrogenic Pattern Formation <i>in Vitro</i>.
Cybern. Syst., 2007
2006
A Parallel Implementation of the Cellular Potts Model for Simulation of Cell-Based Morphogenesis.
Proceedings of the Cellular Automata, 2006
2005
IEEE ACM Trans. Comput. Biol. Bioinform., 2005
2004
Proceedings of the Cellular Automata, 2004
Proceedings of the Cellular Automata, 2004
2003
Proceedings of the Computational Science - ICCS 2003, 2003
Proceedings of the Mathematical Systems Theory in Biology, 2003
2001