Ruhong Zhou
Orcid: 0000-0001-8624-5591
According to our database1,
Ruhong Zhou
authored at least 23 papers
between 2001 and 2025.
Collaborative distances:
Collaborative distances:
Timeline
Legend:
Book In proceedings Article PhD thesis Dataset OtherLinks
Online presence:
-
on orcid.org
On csauthors.net:
Bibliography
2025
Integrating Physics-Based Simulations with Data-Driven Deep Learning Represents a Robust Strategy for Developing Inhibitors Targeting the Main Protease.
J. Chem. Inf. Model., 2025
A free energy perturbation-assisted machine learning strategy for mimotope screening in neoantigen-based vaccine design.
Briefings Bioinform., 2025
2024
IsRNAcirc: 3D structure prediction of circular RNAs based on coarse-grained molecular dynamics simulation.
PLoS Comput. Biol., 2024
2023
OPUS-Fold3: a gradient-based protein all-atom folding and docking framework on TensorFlow.
Briefings Bioinform., September, 2023
2021
CASTELO: clustered atom subtypes aided lead optimization - a combined machine learning and molecular modeling method.
BMC Bioinform., 2021
2012
2011
2010
Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010
2009
Free energy simulations reveal a double mutant avian H5N1 virus hemagglutinin with altered receptor binding specificity.
J. Comput. Chem., 2009
Using a mutual information-based site transition network to map the genetic evolution of influenza A/H3N2 virus.
Bioinform., 2009
2008
IBM J. Res. Dev., 2008
2007
PROTERAN: animated terrain evolution for visual analysis of patterns in protein folding trajectory.
Bioinform., 2007
2006
Magnitude and spatial orientation of the hydrophobic moments of multi-domain proteins.
Int. J. Bioinform. Res. Appl., 2006
Parallel implementation of the replica exchange molecular dynamics algorithm on Blue Gene/L.
Proceedings of the 20th International Parallel and Distributed Processing Symposium (IPDPS 2006), 2006
Proceedings of the Computational Science, 2006
2005
Combinatorial Pattern Discovery Approach for the Folding Trajectory Analysis of a <i>β</i>-Hairpin.
PLoS Comput. Biol., 2005
J. Bioinform. Comput. Biol., 2005
Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore, 2005
2003
J. Parallel Distributed Comput., 2003
A computationally inexpensive modification of the point dipole electrostatic polarization model for molecular simulations.
J. Comput. Chem., 2003
2002
Development of a polarizable force field for proteins via ab initio quantum chemistry: First generation model and gas phase tests.
J. Comput. Chem., 2002
Detecting Native Protein Folds Among Large Decoy Sets with Hydrophobic Moment Profiling.
Proceedings of the 7th Pacific Symposium on Biocomputing, 2002
2001
IBM Syst. J., 2001