Ruibang Luo
Orcid: 0000-0001-9711-6533
According to our database1,
Ruibang Luo
authored at least 29 papers
between 2012 and 2023.
Collaborative distances:
Collaborative distances:
Timeline
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Bibliography
2023
Boosting variant-calling performance with multi-platform sequencing data using Clair3-MP.
BMC Bioinform., December, 2023
Proceedings of the 14th ACM International Conference on Bioinformatics, 2023
Proceedings of the 14th ACM International Conference on Bioinformatics, 2023
2022
Symphonizing pileup and full-alignment for deep learning-based long-read variant calling.
Nat. Comput. Sci., 2022
Generalized radiograph representation learning via cross-supervision between images and free-text radiology reports.
Nat. Mach. Intell., 2022
Duet: SNP-assisted structural variant calling and phasing using Oxford nanopore sequencing.
BMC Bioinform., 2022
Clair3-trio: high-performance Nanopore long-read variant calling in family trios with trio-to-trio deep neural networks.
Briefings Bioinform., 2022
2021
BioNumQA-BERT: answering biomedical questions using numerical facts with a deep language representation model.
Proceedings of the BCB '21: 12th ACM International Conference on Bioinformatics, 2021
2020
Exploring the limit of using a deep neural network on pileup data for germline variant calling.
Nat. Mach. Intell., 2020
Skyhawk: an artificial neural network-based discriminator for reviewing clinically significant genomic variants.
Int. J. Comput. Biol. Drug Des., 2020
Proceedings of the 36th IEEE International Conference on Data Engineering, 2020
MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read Metagenomics.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020
ChromSeg: Two-Stage Framework for Overlapping Chromosome Segmentation and Reconstruction.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020
Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long reads.
Proceedings of the BCB '20: 11th ACM International Conference on Bioinformatics, 2020
2019
RENET: A Deep Learning Approach for Extracting Gene-Disease Associations from Literature.
Proceedings of the Research in Computational Molecular Biology, 2019
2018
MegaPath: Low-Similarity Pathogen Detection from Metagenomic NGS Data (Extended Abstract).
Proceedings of the 8th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2018
2017
MegaGTA: a sensitive and accurate metagenomic gene-targeted assembler using iterative de Bruijn graphs.
BMC Bioinform., 2017
2016
AC-DIAMOND: Accelerating Protein Alignment via Better SIMD Parallelization and Space-Efficient Indexing.
Proceedings of the Bioinformatics and Biomedical Engineering, 2016
2015
MICA: A fast short-read aligner that takes full advantage of Many Integrated Core Architecture (MIC).
BMC Bioinform., 2015
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct <i>de Bruijn</i> graph.
Bioinform., 2015
2014
MICA: A fast short-read aligner that takes full advantage of Intel Many Integrated Core Architecture (MIC).
CoRR, 2014
Bioinform., 2014
FaSD-somatic: a fast and accurate somatic SNV detection algorithm for cancer genome sequencing data.
Bioinform., 2014
2012
COPE: an accurate <i>k</i>-mer-based pair-end reads connection tool to facilitate genome assembly.
Bioinform., 2012
Bioinform., 2012
Efficient SNP-sensitive alignment and database-assisted SNP calling for low coverage samples.
Proceedings of the ACM International Conference on Bioinformatics, 2012