Sascha Ott

According to our database, Sascha Ott authored at least 14 papers between 1999 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

TimeTeller: A tool to probe the circadian clock as a multigene dynamical system.

Denise Vlachou, Maria Veretennikova, Laura Usselmann, Vadim Vasilyev, Sascha Ott, Georg A. Bjarnason, Robert Dallmann, Francis Levi, David A. Rand

PLoS Comput. Biol., February, 2024

2018

Bringing numerous methods for expression and promoter analysis to a public cloud computing service.

Krzysztof Polanski, Bo Gao, Sam A. Mason, Paul Brown, Sascha Ott, Katherine J. Denby, David L. Wild

Bioinform., 2018

2014

Wigwams: identifying gene modules co-regulated across multiple biological conditions.

Krzysztof Polanski, Johanna Rhodes, Claire Hill, Peijun Zhang, Dafyd J. Jenkins, Steven J. Kiddle, Aleksey Jironkin, Jim Beynon, Vicky Buchanan-Wollaston, Sascha Ott, Katherine J. Denby

Bioinform., 2014

2013

MEME-LaB: motif analysis in clusters.

Paul Brown, Laura Baxter, Richard Hickman, Jim Beynon, Jonathan D. Moore, Sascha Ott

Bioinform., 2013

2010

An alignment-free model for comparison of regulatory sequences.

Hashem Koohy, Nigel P. Dyer, John E. Reid, Georgy Koentges, Sascha Ott

Bioinform., 2010

2009

Transcriptional programs: Modelling higher order structure in transcriptional control.

John E. Reid, Sascha Ott, Lorenz Wernisch

BMC Bioinform., 2009

2007

On the complexity of deriving position specific score matrices from positive and negative sequences.

Tatsuya Akutsu, Hideo Bannai, Satoru Miyano, Sascha Ott

Discret. Appl. Math., 2007

A comparative study of S/MAR prediction tools.

Kenneth Evans, Sascha Ott, Annika Hansen, Georgy Koentges, Lorenz Wernisch

BMC Bioinform., 2007

2005

Superiority of network motifs over optimal networks and an application to the revelation of gene network evolution.

Sascha Ott, Annika Hansen, SunYong Kim, Satoru Miyano

Bioinform., 2005

2004

Finding Optimal Models for Small Gene Networks.

Sascha Ott, Seiya Imoto, Satoru Miyano

Proceedings of the Biocomputing 2004, 2004

2003

Intrasplicing - Analysis of Long Intron Sequences.

Sascha Ott, Yoshinori Tamada, Hideo Bannai, Kenta Nakai, Satoru Miyano

Proceedings of the 8th Pacific Symposium on Biocomputing, 2003

2002

On the Complexity of Deriving Position Specific Score Matrices from Examples.

Tatsuya Akutsu, Hideo Bannai, Satoru Miyano, Sascha Ott

Proceedings of the Combinatorial Pattern Matching, 13th Annual Symposium, 2002

Inferring a Union of Halfspaces from Examples.

Tatsuya Akutsu, Sascha Ott

Proceedings of the Computing and Combinatorics, 8th Annual International Conference, 2002

1999

Lower Bounds for Approximating Shortest Superstrings over an Alphabet of Size 2.

Sascha Ott

Proceedings of the Graph-Theoretic Concepts in Computer Science, 1999