Satoru Kuhara

According to our database1, Satoru Kuhara authored at least 38 papers between 1984 and 2014.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Bibliography

2014
A novel method for gathering and prioritizing disease candidate genes based on construction of a set of disease-related MeSH(R) terms.
BMC Bioinform., 2014

2013
The Purity Measure for genomic Regions leads to Horizontally Transferred genes.
J. Bioinform. Comput. Biol., 2013

Infrequent, Unexpected, and Contrast Pattern Discovery from Bacterial Genomes by Genome-wide Comparative Analysis.
Proceedings of the BIOINFORMATICS 2013 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Barcelona, Spain, 11, 2013

2011
hERGAPDbase: a database documenting hERG channel inhibitory potentials and APD-prolongation activities of chemical compounds.
Database J. Biol. Databases Curation, 2011

2010
An Extension Approach for Neural Networks by Introducing a Nearest Neighbor Algorithm in Relative Coordinates.
J. Adv. Comput. Intell. Intell. Informatics, 2010

2009
Unraveling Dynamic Activities of Autocrine Pathways that Control Drug-Response Transcriptome Networks.
Proceedings of the Biocomputing 2009: Proceedings of the Pacific Symposium, 2009

2008
Evaluating Protein Sequence Signatures Inferred from Protein-Protein Interaction Data by Gene Ontology Annotations.
Proceedings of the 2008 IEEE International Conference on Bioinformatics and Biomedicine, 2008

2006
Gene subset selection in kernel-induced feature space.
Pattern Recognit. Lett., 2006

Recursive gene selection based on maximum margin criterion: a comparison with SVM-RFE.
BMC Bioinform., 2006

Computational Strategy for Discovering Druggable Gene Networks from Genome-Wide RNA Expression Profiles.
Proceedings of the Biocomputing 2006, 2006

2005
Multiclass Molecular Cancer Classification by Kernel Subspace Methods with Effective Kernel Parameter Selection.
J. Bioinform. Comput. Biol., 2005

Reconstructing phylogenetic trees of prokaryote genomes by randomly sampling oligopeptides.
Int. J. Bioinform. Res. Appl., 2005

2004
An Integrated Comprehensive Workbench for Inferring Genetic Networks: <i>voyagene</i>.
J. Bioinform. Comput. Biol., 2004

Combining Microarrays and Biological Knowledge for Estimating Gene Networks via Bayesian Networks.
J. Bioinform. Comput. Biol., 2004

2003
A simple greedy algorithm for finding functional relations: efficient implementation and average case analysis.
Theor. Comput. Sci., 2003

Identification of genetic networks by strategic gene disruptions and gene overexpressions under a boolean model.
Theor. Comput. Sci., 2003

Deduction of a gene regulatory relationship framework from gene expression data by the application of graphical Gaussian modeling.
Signal Process., 2003

Use of Gene Networks for Identifying and Validating Drug Targets.
J. Bioinform. Comput. Biol., 2003

Bayesian Network and Nonparametric Heteroscedastic Regression for Nonlinear Modeling of Genetic Network.
J. Bioinform. Comput. Biol., 2003

Estimating gene networks from gene expression data by combining Bayesian network model with promoter element detection.
Proceedings of the European Conference on Computational Biology (ECCB 2003), 2003

2002
Fast algorithm for extracting multiple unordered short motifs using bit operations.
Inf. Sci., 2002

2001
Learning Conformation Rules.
Proceedings of the Discovery Science, 4th International Conference, DS 2001, Washington, 2001

2000
Algorithms for Identifying Boolean Networks and Related Biological Networks Based on Matrix Multiplication and Fingerprint Function.
J. Comput. Biol., 2000

Inferring qualitative relations in genetic networks and metabolic pathways.
Bioinform., 2000

A Simple Greedy Algorithm for Finding Functional Relations: Efficient Implementation and Average Case Anaylsis.
Proceedings of the Discovery Science, 2000

1999
The hydrophobic cores of proteins predicted by wavelet analysis.
Bioinform., 1999

Use of Bonsai Decision Trees for the Identification of Potential MHC Class I Peptide Epitope Motifs.
Proceedings of the 4th Pacific Symposium on Biocomputing, 1999

Identification of Genetic Networks from a Small Number of Gene Expression Patterns Under the Boolean Network Model.
Proceedings of the 4th Pacific Symposium on Biocomputing, 1999

1998
Identification of Gene Regulatory Networks by Strategic Gene Disruptions and Gene Overexpressions.
Proceedings of the Ninth Annual ACM-SIAM Symposium on Discrete Algorithms, 1998

1997
Application of a deductive database system to search for topological and similar three-dimensional structures in protein.
Comput. Appl. Biosci., 1997

Extraction of Substructures of Proteins Essential to their Biological Functions by a Data Mining Technique.
Proceedings of the 5th International Conference on Intelligent Systems for Molecular Biology, 1997

1995
Data Classification Component in a Deductive Database System and Its Application to Protein Structural Analysis.
IEICE Trans. Inf. Syst., 1995

BONSAI Garden: Parallel Knowledge Discovery System for Amino Acid Sequences.
Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology, 1995

1994
Development of an integrated Database for Genome Mapping and Nucleotide Sequences.
Proceedings of the 27th Annual Hawaii International Conference on System Sciences (HICSS-27), 1994

Application of a Deductive Database System PACADE toward Discovery of Clusters of Similar Structures in Proteins.
Proceedings of the 27th Annual Hawaii International Conference on System Sciences (HICSS-27), 1994

1993
A Machine Discovery from Amino Acid Sequences by Decision Trees over Regular Patterns.
New Gener. Comput., 1993

A deductive database system PACADE for analyzing 3-D and secondary structures of protein.
Comput. Appl. Biosci., 1993

1984
GENAS: a database system for nucleic acid sequence analysis.
Nucleic Acids Res., 1984


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