Thomas D. Wu

According to our database, Thomas D. Wu authored at least 23 papers between 1990 and 2016.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of four.

2016

Bitpacking techniques for indexing genomes: II. Enhanced suffix arrays.

Thomas D. Wu

Algorithms Mol. Biol., 2016

Bitpacking techniques for indexing genomes: I. Hash tables.

Thomas D. Wu

Algorithms Mol. Biol., 2016

GMAP and GSNAP for Genomic Sequence Alignment: Enhancements to Speed, Accuracy, and Functionality.

Thomas D. Wu, Jens Reeder, Michael Lawrence, Gabe Becker, Matthew J. Brauer

Proceedings of the Statistical Genomics - Methods and Protocols, 2016

2013

Probabilistic Evaluation of Candidates and Symptom Clustering for Multidisorder Diagnosis

Thomas D. Wu

CoRR, 2013

2012

Compression of structured high-throughput sequencing data

Fabien Campagne, Kevin C. Dorff, Nyasha Chambwe, James T. Robinson, Jill P. Mesirov, Thomas D. Wu

CoRR, 2012

2010

Fast and SNP-tolerant detection of complex variants and splicing in short reads.

Thomas D. Wu, Serban Nacu

Bioinform., 2010

2005

GMAP: a genomic mapping and alignment program for mRNA and EST sequence.

Thomas D. Wu, Colin K. Watanabe

Bioinform., 2005

2004

GEPIS - quantitative gene expression profiling in normal and cancer tissues.

Yan Zhang, David A. Eberhard, Gretchen D. Frantz, Patrick Dowd, Thomas D. Wu, Yan Zhou, Colin K. Watanabe, Shiuh-Ming Luoh, Paul Polakis, Kenneth J. Hillan, William I. Wood, Zemin Zhang

Bioinform., 2004

2002

Large-scale analysis of gene expression profiles.

Thomas D. Wu

Briefings Bioinform., 2002

2000

Fast probabilistic analysis of sequence function using scoring matrices.

Thomas D. Wu, Craig G. Nevill-Manning, Douglas L. Brutlag

Bioinform., 2000

1999

Minimal-Risk Scoring Matrices for Sequence Analysis.

Thomas D. Wu, Craig G. Nevill-Manning, Douglas L. Brutlag

J. Comput. Biol., 1999

Building Intrusion-Tolerant Applications.

Thomas D. Wu, Michael Malkin, Dan Boneh

Proceedings of the 8th USENIX Security Symposium, Washington, DC, USA, August 23-26, 1999, 1999

A Real-World Analysis of Kerberos Password Security.

Thomas D. Wu

Proceedings of the Network and Distributed System Security Symposium, 1999

Experimenting with Shared Generation of RSA Keys.

Michael Malkin, Thomas D. Wu, Dan Boneh

Proceedings of the Network and Distributed System Security Symposium, 1999

1998

Regression Analysis of Multiple Protein Structures.

Thomas D. Wu, Scott C. Schmidler, Trevor Hastie, Douglas L. Brutlag

J. Comput. Biol., 1998

The Secure Remote Password Protocol.

Thomas D. Wu

Proceedings of the Network and Distributed System Security Symposium, 1998

1997

Enumerating and Ranking Discrete Motifs.

Craig G. Nevill-Manning, Komal S. Sethi, Thomas D. Wu, Douglas L. Brutlag

Proceedings of the 5th International Conference on Intelligent Systems for Molecular Biology, 1997

1996

A Segment-Based Dynamic Programming Algorithm for Predicting Gene Structure.

Thomas D. Wu

J. Comput. Biol., 1996

Discovering Empirically Conserved Amino Acid Substitution Groups in Databases of Protein Families.

Thomas D. Wu, Douglas L. Brutlag

Proceedings of the Fourth International Conference on Intelligent Systems for Molecular Biology, 1996

1995

Identification of Protein Motifs Using Conserved Amino Acid Properties and Partitioning Techniques.

Thomas D. Wu, Douglas L. Brutlag

Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology, 1995

1991

Domain Structure and the Complexity of Diagnostic Problem Solving.

Thomas D. Wu

Proceedings of the 9th National Conference on Artificial Intelligence, 1991

1990

Probabilistic evaluation of candidate sets for multidisorder diagnosis.

Thomas D. Wu

Proceedings of the UAI '90: Proceedings of the Sixth Annual Conference on Uncertainty in Artificial Intelligence, 1990

Efficient Diagnosis of Multiple Disorders Based on a Symptom Clustering Approach.

Thomas D. Wu

Proceedings of the 8th National Conference on Artificial Intelligence. Boston, Massachusetts, USA, July 29, 1990