Thomas L. Casavant

According to our database1, Thomas L. Casavant authored at least 77 papers between 1986 and 2019.

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Bibliography

2019
Machine learning with the TCGA-HNSC dataset: improving usability by addressing inconsistency, sparsity, and high-dimensionality.
BMC Bioinformatics, 2019

2017
Development of a radiobiological evaluation tool to assess the expected clinical impacts of contouring accuracy between manual and semi-automated segmentation algorithms.
Proceedings of the 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2017

2015
CNV-ROC: A cost effective, computer-aided analytical performance evaluator of chromosomal microarrays.
Journal of Biomedical Informatics, 2015

2014
Cordova: Web-based management of genetic variation data.
Bioinformatics, 2014

2013
Computational identification of operon-like transcriptional loci in eukaryotes.
Comp. in Bio. and Med., 2013

2012
Coex-Rank: An approach incorporating co-expression information for combined analysis of microarray data.
J. Integrative Bioinformatics, 2012

2011
Validation of computational prediction of horizontal gene transfer events - XenoCluster.
The Journal of Supercomputing, 2011

AudioGene: Computer-based prediction of genetic factors involved in non-syndromic hearing impairment.
Proceedings of the 9th IEEE/ACS International Conference on Computer Systems and Applications, 2011

Sequencing and disease variation detection tools and techniques.
Proceedings of the 9th IEEE/ACS International Conference on Computer Systems and Applications, 2011

2009
Multi-granularity Parallel Computing in a Genome-Scale Molecular Evolution Application.
Proceedings of the Parallel Computing Technologies, 10th International Conference, 2009

2008
A knowledge-based approach to predict intragenic deletions or duplications.
Bioinformatics, 2008

2007
Transcript Annotation Prioritization and Screening System (TRApss) for Mutation Screening.
J. Bioinformatics and Computational Biology, 2007

2006
First Exons and Introns - A Survey of GC Content and Gene Structure in the Human Genome.
In Silico Biology, 2006

2005
Gene transcript clustering: a comparison of parallel approaches.
Future Generation Comp. Syst., 2005

XenoCluster: A Grid Computing Approach to Finding Ancient Evolutionary Genetic Anomalies.
Proceedings of the Parallel Computing Technologies, 2005

2003
Identifying Candidate Disease Genes with High-Performance Computing.
The Journal of Supercomputing, 2003

ESTprep: Preprocessing CDNA Sequence Reads.
Bioinformatics, 2003

Alternative Parallelization Strategies in EST Clustering.
Proceedings of the Parallel Computing Technologies, 2003

2002
Parallel creation of non-redundant gene indices from partial mRNA transcripts.
Future Generation Comp. Syst., 2002

Pooled library tissue tags for EST-based gene discovery.
Bioinformatics, 2002

2001
A parallel/distributed architecture for hierarchically heterogeneous web-based cooperative applications.
Future Generation Comp. Syst., 2001

Parallelization of local BLAST service on workstation clusters.
Future Generation Comp. Syst., 2001

A Parallel Expressed Sequence Tag (EST) Clustering Program.
Proceedings of the Parallel Computing Technologies, 2001

I-DOCS: Distributed Agent-Assisted Knowledge Fusion for Disease Gene Discovery.
Proceedings of the Eigth International Conference on Parallel and Distributed Systems, 2001

1999
Three Complementary Approaches to Parallelization of Local BLAST Service on Workstation Clusters (invited paper).
Proceedings of the Parallel Computing Technologies, 1999

A Parallel/Distributed Srchitecture for Hierarcally Heterogeneous Web-Based Cooperative Applications.
Proceedings of the High-Performance Computing and Networking, 7th International Conference, 1999

1998
GenoMap: A Distributed System for Unifying Genotyping and Genetic Linkage Analysis.
Parallel Computing, 1998

1997
Perspectives on high performance network computing.
Future Generation Comp. Syst., 1997

Using Run-Time Uncertainty to Robustly Schedule Parallel Computation.
Proceedings of the Parallel Computing Technologies, 1997

Modeling the impact of run-time uncertainty on optimal computation scheduling using feedback.
Proceedings of the 1997 International Conference on Parallel Processing (ICPP '97), 1997

1996
Accounting for Uncertainty in the Recovers of Traces for Parallel Computing Systems.
Proceedings of the Parcella 1996, 1996

Mapping Techniques for Parallel Evaluation of Chains of Recurrences.
Proceedings of IPPS '96, 1996

Perspectives for High Performance Computing in Workstation Networks.
Proceedings of the High-Performance Computing and Networking, 1996

1995
Implementing communication latency hiding in high-latency computer networks.
Proceedings of the High-Performance Computing and Networking, 1995

1994
Trace Recovery in Multi-Processing Systems: Architectural Considerations.
Proceedings of the 1994 International Conference on Parallel Processing, 1994

Exploting communication Latency Hiding for Parallel Network.
Proceedings of the Proceedings 1994 International Conference on Parallel and Distributed Systems, 1994

What Types of Research Papers Should We Be Writing?
Proceedings of the Proceedings 1994 International Conference on Parallel and Distributed Systems, 1994

Using Perturbation Tracking to Compensate for Intrusion in Message-Passing Systems.
Proceedings of the 14th International Conference on Distributed Computing Systems, 1994

Readings in distributed computing systems.
IEEE, ISBN: 978-0-8186-3032-3, 1994

1993
Tools and Methods for Visualization of Parallel Systems and Computations - Guest Editor's Introduction.
J. Parallel Distrib. Comput., 1993

The IMPROV Meta-Tool Design Methodology for Visualization of Parallel Programs.
Proceedings of the MASCOTS '93, 1993

Critical Performance Path Analysis, and Efficient Code Generation Issues, for the Seamless Architecture.
Proceedings of the Seventh International Parallel Processing Symposium, 1993

1992
Specification and Analysis of Parallel/Distributed Software and Systems by Petri Nets With Transition Enabling Functions.
IEEE Trans. Software Eng., 1992

Report of the Purdue Workshop on Grand Challenges in Computer Architecture for the Support of High Performance Computing.
J. Parallel Distrib. Comput., 1992

Models and Algorithms for Coscheduling Compute-Intensive Tasks on a Network of Workstations.
J. Parallel Distrib. Comput., 1992

Seamless - a latency-tolerant RISC-based multiprocessor architecture.
Proceedings of the 19th Annual International Symposium on Computer Architecture. Gold Coast, 1992

The Seamless Approach to Reconciling Communication and Locality in Distributed-Memory Parallel Systems.
Proceedings of the 6th International Parallel Processing Symposium, 1992

A Preliminary Performance Evaluation of the Seamless Parallel Processing System Architecture.
Proceedings of the 1992 International Conference on Parallel Processing, 1992

A software engineering, visualization methodology for parallel processing systems.
Proceedings of the Sixteenth Annual International Computer Software and Applications Conference, 1992

1991
Experimental Analysis of a Mixed-Mode Parallel Architecture Using Bitonic Sequence Sorting.
J. Parallel Distrib. Comput., 1991

Distributed Computing Systems (Guest Editors' Introduction).
IEEE Computer, 1991

CAPS: A Coding Aid For PASM.
Commun. ACM, 1991

Use of PARADISE: A Meta-Tool for Visualizing Parallel Systems.
Proceedings of the Fifth International Parallel Processing Symposium, Proceedings, Anaheim, California, USA, April 30, 1991

XPAT: An Interactive Graphical Tool for Synthesis of Concurrent Software Using Petri Nets.
Proceedings of the International Conference on Parallel Processing, 1991

Recovering Unconrupted Event Traces from Corrupted Event Traces in Parallel/Distributed Computing Systems.
Proceedings of the International Conference on Parallel Processing, 1991

Debugging and performance monitoring for distributed systems: problems and prospects.
Proceedings of the 10th International Conference on Distributed Computing Systems (ICDCS 1991), 1991

Co-scheduling compute-intensive tasks on a network of workstations: model and algorithms.
Proceedings of the 10th International Conference on Distributed Computing Systems (ICDCS 1991), 1991

Design of a system for software testing and debugging for multiprocessor avionics systems.
Proceedings of the Fifteenth Annual International Computer Software and Applications Conference, 1991

1990
A Communicating Finite Automata Approach to Modeling Distributed Computation and Its Application to Distributed Decision-Making.
IEEE Trans. Computers, 1990

Models for Monitoring and Debugging Tools for Parallel and Distributed Software.
J. Parallel Distrib. Comput., 1990

Experimental analysis of communication/data-conditional aspects of a mixed-mode parallel architecture via synthetic computations.
Proceedings of the Proceedings Supercomputing '90, New York, NY, USA, November 12-16, 1990, 1990

Optimizing Task Migration Transfers Using Multistage Cube Networks.
Proceedings of the 1990 International Conference on Parallel Processing, 1990

An Experimental Analysis of Image Correlation on Shared versus Non-Shared Memory MIMD Parallel Computers.
Proceedings of the 1990 International Conference on Parallel Processing, 1990

Experimental Analysis of a Mixed-Mode Parallel Architecture Performing Sequence Sorting.
Proceedings of the 1990 International Conference on Parallel Processing, 1990

Specification and Identification of Events for Debugging and Performance Monitoring of Distributed Multiprocessor Systems.
Proceedings of the 10th International Conference on Distributed Computing Systems (ICDCS 1990), May 28, 1990

Mathematical transformation of Petri-nets for development of parallel/distributed programs.
Proceedings of the Fourteenth Annual International Computer Software and Applications Conference, 1990

1989
Task Migration Transfers in Multistage Cube Based Parallel Systems.
Proceedings of the International Conference on Parallel Processing, 1989

Experimental Application-Driven Architecture Analysis of an SIMD/MIMD Parallel Processing System.
Proceedings of the International Conference on Parallel Processing, 1989

Software routing support for task migration in hypercube multiprocessor systems.
Proceedings of the 13th Annual International Computer Software and Applications Conference, 1989

A model for monitoring and debugging parallel and distributed software.
Proceedings of the 13th Annual International Computer Software and Applications Conference, 1989

1988
Effects of Response and Stability on Scheduling in Distributed Computing Systems.
IEEE Trans. Software Eng., 1988

A Taxonomy of Scheduling in General-Purpose Distributed Computing Systems.
IEEE Trans. Software Eng., 1988

Non-Deterministic Instruction Time Experiments on the PASM System Prototype.
Proceedings of the International Conference on Parallel Processing, 1988

Experimental analysis of SIMD recursive digital filtering on the PASM system prototype.
Proceedings of the Twelfth International Computer Software and Applications Conference, 1988

Low-level programming of parallel supercomputers.
Proceedings of the Twelfth International Computer Software and Applications Conference, 1988

1987
Analysis of Three Dynamic Distributed Load-Balancing Strategies with Varying Global Information Requirements.
Proceedings of the 7th International Conference on Distributed Computing Systems, 1987

1986
A Formal Model of Distributed Decision-Making and Its Application to Distributed Load Balancing.
Proceedings of the 6th International Conference on Distributed Computing Systems, 1986


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