Yong Zhang

According to our database, Yong Zhang authored at least 11 papers between 2004 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Prediction of soil probiotics based on foundation model representation enhancement and stacked aggregation classifier.

Qiang Kang, Haotong Sun, Yayu Wang, Xiaolong Fang, Yuxiang Li, Yong Zhang, Tong Wei, Peng Yin

Briefings Bioinform., 2025

2024

Multi-omics integration for both single-cell and spatially resolved data based on dual-path graph attention auto-encoder.

Tongxuan Lv, Yong Zhang, Junlin Liu, Qiang Kang, Lin Liu

Briefings Bioinform., September, 2024

2023

Computational Approaches and Challenges in Spatial Transcriptomics.

Shuangsang Fang, Bichao Chen, Yong Zhang, Haixi Sun, Longqi Liu, Shiping Liu, Yuxiang Li, Xun Xu

Genom. Proteom. Bioinform., 2023

2021

SOAPMetaS: profiling large metagenome datasets efficiently on distributed clusters.

Shixu He, Zhibo Huang, Xiaohan Wang, Lin Fang, Shengkang Li, Yong Zhang, Gengyun Zhang

Bioinform., 2021

2020

SOAPTyping: an open-source and cross-platform tool for sequence-based typing for HLA class I and II alleles.

Yong Zhang, Yongsheng Chen, Huixin Xu, Junbin Fang, Zijian Zhao, Weipeng Hu, Xiaoqin Yang, Jia Ye, Yun Cheng, Jiayin Wang, Weiqiang Sun, Jian Wang, Huanming Yang, Jing Yan, Lin Fang

BMC Bioinform., 2020

2018

WEGO 2.0: a web tool for analyzing and plotting GO annotations, 2018 update.

Jia Ye, Yong Zhang, Huihai Cui, Jiawei Liu, Yuqing Wu, Yun Cheng, Huixing Xu, Xingxin Huang, Shengting Li, An Zhou, Xiuqing Zhang, Lars Bolund, Qiang Chen, Jian Wang, Huanming Yang, Lin Fang, Chunmei Shi

Nucleic Acids Res., 2018

2010

Evolutionary Transients in the Rice Transcriptome.

Jun Wang, Jianguo Zhang, Ruiqiang Li, Hongkun Zheng, Jun Li, Yong Zhang, Heng Li, Peixiang Ni, Songgang Li, Shengting Li, Jingqiang Wang, Dongyuan Liu, Jason E. McDermott, Ram Samudrala, Siqi Liu, Jian Wang, Huanming Yang, Jun Yu, Gane Ka-Shu Wong

Genom. Proteom. Bioinform., 2010

2007

MAPU: Max-Planck Unified database of organellar, cellular, tissue and body fluid proteomes.

Yanling Zhang, Yong Zhang, Jun Adachi, Jesper V. Olsen, Rong Shi, Gustavo de Souza, Erica Pasini, Leonard J. Foster, Boris Macek, Alexandre Zougman, Chanchal Kumar, Jacek R. Wisniewski, Jan Wang, Matthias Mann

Nucleic Acids Res., 2007

2006

WEGO: a web tool for plotting GO annotations.

Jia Ye, Lin Fang, Hongkun Zheng, Yong Zhang, Jie Chen, Zengjin Zhang, Jing Wang, Shengting Li, Ruiqiang Li, Lars Bolund, Jun Wang

Nucleic Acids Res., 2006

2005

ChickVD: a sequence variation database for the chicken genome.

Jing Wang, Ximiao He, Jue Ruan, Mingtao Dai, Jie Chen, Yong Zhang, Yafeng Hu, Chen Ye, Shengting Li, Lijuan Cong, Lin Fang, Bin Liu, Songgang Li, Jian Wang, David W. Burt, Gane Ka-Shu Wong, Jun Yu, Huanming Yang, Jun Wang

Nucleic Acids Res., 2005

2004

BGI-RIS: an integrated information resource and comparative analysis workbench for rice genomics.

Wenming Zhao, Jing Wang, Ximiao He, Xiaobing Huang, Yongzhi Jiao, Mingtao Dai, Shulin Wei, Jian Fu, Ye Chen, Xiaoyu Ren, Yong Zhang, Peixiang Ni, Jianguo Zhang, Songgang Li, Jian Wang, Gane Ka-Shu Wong, Hongyu Zhao, Jun Yu, Huanming Yang, Jun Wang

Nucleic Acids Res., 2004