Yukako Tohsato

According to our database, Yukako Tohsato authored at least 19 papers between 2000 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Gene Deletion Algorithms for Minimum Reaction Network Design by Mixed-Integer Linear Programming for Metabolite Production in Constraint-Based Models: gDel_minRN.

Takeyuki Tamura, Ai Muto-fujita, Yukako Tohsato, Tomoyuki Kosaka

J. Comput. Biol., May, 2023

Large-scale Image Processing and Three-Dimensional Reconstruction of Mouse Brains with Neurogenic-Tagged Neurons.

Hiroto Kawabata, Yuki Shimojo, Tatsumi Hirata, Yukako Tohsato

Proceedings of the 2023 13th International Conference on Biomedical Engineering and Technology, 2023

2022

Unsupervised Domain Adaptation Using Temporal Association for Segmentation and Its Application to C. elegans Time-Lapse Images.

Hiroaki Nozaki, Yukako Tohsato

Proceedings of the Artificial Neural Networks and Machine Learning - ICANN 2022, 2022

Phenotype Anomaly Detection for Biological Dynamics Data Using a Deep Generative Model.

Eisuke Ito, Takaya Ueda, Ryo Takano, Yukako Tohsato, Koji Kyoda, Shuichi Onami, Ikuko Nishikawa

Proceedings of the Artificial Neural Networks and Machine Learning - ICANN 2022, 2022

2020

Temporal Anomaly Detection by Deep Generative Models with Applications to Biological Data.

Takaya Ueda, Yukako Tohsato, Ikuko Nishikawa

Proceedings of the Artificial Neural Networks and Machine Learning - ICANN 2020, 2020

2019

Analysis of Time Series Anomalies Using Causal InfoGAN and Its Application to Biological Data.

Takaya Ueda, Masataka Seo, Yukako Tohsato, Ikuko Nishikawa

Proceedings of the Advances in Natural Computation, Fuzzy Systems and Knowledge Discovery - Proceedings of the 15th International Conference on Natural Computation, Fuzzy Systems and Knowledge Discovery (ICNC-FSKD 2019), Kunming, China, July 20-22, 2019, 2019

Characterizing Phenotype Abnormality by Variational Auto Encoder.

Yuki Kimura, Takaya Ueda, Seo Masataka, Yukako Tohsato, Ikuko Nishikawa

Proceedings of the Advances in Natural Computation, Fuzzy Systems and Knowledge Discovery - Proceedings of the 15th International Conference on Natural Computation, Fuzzy Systems and Knowledge Discovery (ICNC-FSKD 2019), Kunming, China, July 20-22, 2019, 2019

2017

Phenotype Analysis Method for Identification of Gene Functions Involved in Asymmetric Division of <i>Caenorhabditis elegans</i>.

Sihai Yang, Xian-Hua Han, Yukako Tohsato, Koji Kyoda, Shuichi Onami, Ikuko Nishikawa, Yen-Wei Chen

J. Comput. Biol., 2017

2016

Nuclear detection in 4D microscope images of a developing embryo using an enhanced probability map of top-ranked intensity-ordered descriptors.

Xian-Hua Han, Yukako Tohsato, Koji Kyoda, Shuichi Onami, Ikuko Nishikawa, Yen-Wei Chen

IPSJ Trans. Comput. Vis. Appl., 2016

SSBD: a database of quantitative data of spatiotemporal dynamics of biological phenomena.

Yukako Tohsato, Kenneth H. L. Ho, Koji Kyoda, Shuichi Onami

Bioinform., 2016

2015

GenoBase: comprehensive resource database of <i>Escherichia coli</i> K-12.

Yuta Otsuka, Ai Muto, Rikiya Takeuchi, Chihiro Okada, Motokazu Ishikawa, Koichiro Nakamura, Natsuko Yamamoto, Hitomi Dose, Kenji Nakahigashi, Shigeki Tanishima, Sivasundaram Suharnan, Wataru Nomura, Toru Nakayashiki, Walid G. Aref, Barry R. Bochner, Tyrrell Conway, Michael Gribskov, Daisuke Kihara, Kenneth E. Rudd, Yukako Tohsato, Barry L. Wanner, Hirotada Mori

Nucleic Acids Res., 2015

Biological Dynamics Markup Language (BDML): an open format for representing quantitative biological dynamics data.

Koji Kyoda, Yukako Tohsato, Kenneth H. L. Ho, Shuichi Onami

Bioinform., 2015

Nuclear detection in 4D microscope images using enhanced probability map of top-ranked intensity-ordered descriptors.

Xian-Hua Han, Yukako Tohsato, Koji Kyoda, Shuichi Onami, Ikuko Nishikawa, Yen-Wei Chen

Proceedings of the 3rd IAPR Asian Conference on Pattern Recognition, 2015

2013

ECOH: An Enzyme Commission number predictor using mutual information and a support vector machine.

Yoshihiko Matsuta, Masahiro Ito, Yukako Tohsato

Bioinform., 2013

Prediction of protein phosphorylation sites by support vector machines.

Tomoki Ishino, Ikuko Nishikawa, Yukako Tohsato, Satoshi Fukuchi, Ken Nishikawa

Proceedings of the 6th International Conference on Biomedical Engineering and Informatics, 2013

2004

Heterogeneous Database Federation Using Grid Technology for Drug Discovery Process.

Yukako Tohsato, Takahiro Kosaka, Susumu Date, Shinji Shimojo, Hideo Matsuda

Proceedings of the Grid Computing in Life Science, 2004

2003

Clustering Method for Comparative Analysis between Genomes and Pathways.

Shoko Miyake, Yukako Tohsato, Yoichi Takenaka, Hideo Matsuda

Proceedings of the Eighth International Conference on Database Systems for Advanced Applications (DASFAA '03), 2003

2002

An Application of a Pathway Alignment Method to Comparative Analysis between Genome and Pathways.

Shoko Miyake, Yukako Tohsato, Hideo Matsuda

Proceedings of the 1st IEEE Computer Society Bioinformatics Conference, 2002

2000

A Multiple Alignment Algorithm for Metabolic Pathway Analysis Using Enzyme Hierarchy.

Yukako Tohsato, Hideo Matsuda, Akihiro Hashimoto

Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology, 2000