Z. Meral Özsoyoglu

Mehmet Koyutürk

IEEE ACM Trans. Comput. Biol. Bioinform., 2018

2015

One Size Does not Fit All: When to Use Signature-based Pruning to Improve Template Matching for RDF graphs.

[BibT_eX]

[DOI]

CoRR, 2015

RBench: Application-Specific RDF Benchmarking.

[BibT_eX]

[DOI]

Proceedings of the 2015 ACM SIGMOD International Conference on Management of Data, Melbourne, Victoria, Australia, May 31, 2015

An exploratory graph query interface for biomedical data.

[BibT_eX]

[DOI]

Cheng Yang

Proceedings of the 6th ACM Conference on Bioinformatics, 2015

Integrated querying of disparate association and interaction data in biomedical applications.

[BibT_eX]

[DOI]

Mehmet Koyutürk

Proceedings of the 6th ACM Conference on Bioinformatics, 2015

2014

Special issue on best papers of VLDB 2012.

[BibT_eX]

[DOI]

VLDB J., 2014

Path-Counting Formulas for Generalized Kinship Coefficients and Condensed Identity Coefficients.

[BibT_eX]

[DOI]

Comput. Math. Methods Medicine, 2014

An online system for metabolic network analysis.

[BibT_eX]

[DOI]

Abdullah Ercument Cicek

Zehra Meral Özsoyoglu

Database J. Biol. Databases Curation, 2014

2013

Foreword to invited papers issue.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 2013

An online model composition tool for system biology models.

[BibT_eX]

[DOI]

BMC Syst. Biol., 2013

2012

Foreword.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 2012

Message from the VLDB 2012 General Program Chair.

[BibT_eX]

[DOI]

Proc. VLDB Endow., 2012

Letter from the Editor-in-Chief.

[BibT_eX]

[DOI]

Proc. VLDB Endow., 2012

PathCase-SB: integrating data sources and providing tools for systems biology research.

[BibT_eX]

[DOI]

BMC Syst. Biol., 2012

Efficient path-based computations on pedigree graphs with compact encodings.

[BibT_eX]

[DOI]

Lei Yang

BMC Bioinform., 2012

2011

Foreword to TODS invited papers issue 2011.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 2011

Classification of Large microarray Datasets Using Fast Random Forest Construction.

[BibT_eX]

[DOI]

J. Bioinform. Comput. Biol., 2011

PathCase-SB architecture and database design.

[BibT_eX]

[DOI]

BMC Syst. Biol., 2011

Using compact encodings for path-based computations on pedigree graphs.

[BibT_eX]

[DOI]

Lei Yang

Proceedings of the ACM International Conference on Bioinformatics, 2011

2010

Foreword to TODS invited papers issue.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 2010

Advanced querying interface for biochemical network databases.

[BibT_eX]

[DOI]

Proceedings of the 2010 ACM Symposium on Applied Computing (SAC), 2010

COKGEN: A Software for the Identification of Rare Copy Number Variation from SNP Microarrays.

[BibT_eX]

[DOI]

Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010

Efficient query evaluation for DAG-shaped hierarchies.

[BibT_eX]

[DOI]

Ali Cakmak

Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

Analyzing metabolite measurements for automated prediction of underlying biological mechanisms.

[BibT_eX]

[DOI]

Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

2009

Foreword to TODS SIGMOD/PODS 2008 special issue.

[BibT_eX]

[DOI]

Dennis E. Shasha

Maurizio Lenzerini

ACM Trans. Database Syst., 2009

Efficient Computation of Kinship and Identity Coefficients on Large Pedigrees.

[BibT_eX]

[DOI]

Brendan Elliott

J. Bioinform. Comput. Biol., 2009

Efficiently calculating inbreeding on large pedigrees databases.

[BibT_eX]

[DOI]

Inf. Syst., 2009

Corrigendum for Elliott, B. <i>et al.</i>, 'PathCase pathways database system', Bioinformatics 2008, 24(21) 2526-2533.

[BibT_eX]

[DOI]

Bioinform., 2009

Efficient k-word proximity search.

[BibT_eX]

[DOI]

Chirag Gupta

Proceedings of the 24th International Symposium on Computer and Information Sciences, 2009

A web-based data source for metabolomics.

[BibT_eX]

[DOI]

Proceedings of the 24th International Symposium on Computer and Information Sciences, 2009

A complete translation from SPARQL into efficient SQL.

[BibT_eX]

[DOI]

Brendan Elliott

Chimezie Thomas-Ogbuji

Proceedings of the International Database Engineering and Applications Symposium (IDEAS 2009), 2009

2008

Foreword to TODS SIGMOD/PODS/ICDT 2007 special issue.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 2008

PathCase: pathways database system.

[BibT_eX]

[DOI]

Bioinform., 2008

Annotation suggestion and search for personal multimedia objects on the web.

[BibT_eX]

[DOI]

Brendan Elliott

Proceedings of the 7th ACM International Conference on Image and Video Retrieval, 2008

2007

Efficient Evaluation of Inbreeding Queries on Pedigree Data.

[BibT_eX]

[DOI]

Proceedings of the 19th International Conference on Scientific and Statistical Database Management, 2007

Gene Ontology-Based Annotation Analysis and Categorization of Metabolic Pathways.

[BibT_eX]

[DOI]

Proceedings of the 19th International Conference on Scientific and Statistical Database Management, 2007

2006

A Framework for Querying Pedigree Data.

[BibT_eX]

[DOI]

Proceedings of the 18th International Conference on Scientific and Statistical Database Management, 2006

2005

Rewriting XPath Queries Using Materialized Views.

[BibT_eX]

[DOI]

Wanhong Xu

Proceedings of the 31st International Conference on Very Large Data Bases, Trondheim, Norway, August 30, 2005

2004

Querying web metadata: Native score management and text support in databases.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 2004

On Automated Lesson Construction from Electronic Textbooks.

[BibT_eX]

[DOI]

IEEE Trans. Knowl. Data Eng., 2004

Metadata-based modeling of information resources on the Web.

[BibT_eX]

[DOI]

Selma Ayse Özel

Özgür Ulusoy

J. Assoc. Inf. Sci. Technol., 2004

Towards an Integrated Software System for Biological Pathways.

[BibT_eX]

[DOI]

IEEE Data Eng. Bull., 2004

Letter from the Special Issue Editor.

[BibT_eX]

[DOI]

IEEE Data Eng. Bull., 2004

Novel Approaches to Biomolecular Sequence Indexing.

[BibT_eX]

[DOI]

Emre Karakoç

Süleyman Cenk Sahinalp

Murat Tasan

Xiang Zhang

IEEE Data Eng. Bull., 2004

Improvements in Distance-Based Indexing.

[BibT_eX]

[DOI]

Murat Tasan

Proceedings of the 16th International Conference on Scientific and Statistical Database Management (SSDBM 2004), 2004

A Tree-Structured Query Interface for Querying Semi-Structured Data.

[BibT_eX]

[DOI]

Scott Newman

Proceedings of the 16th International Conference on Scientific and Statistical Database Management (SSDBM 2004), 2004

2003

Pathways Database System.

[BibT_eX]

[DOI]

Joseph H. Nadeau

OMICS, 2003

Pathways Database System: An Integrated System for Biological Pathways.

[BibT_eX]

[DOI]

Larkshmi Krishnamurthy

Bioinform., 2003

Pathways Database System: An Integrated Set of Tools for Biological Pathways.

[BibT_eX]

[DOI]

Wanhong Xu

Larkshmi Krishnamurthy

Proceedings of the 2003 ACM Symposium on Applied Computing (SAC), 2003

Distance Based Indexing for String Proximity Search.

[BibT_eX]

[DOI]

Süleyman Cenk Sahinalp

Murat Tasan

Jai Macker

Proceedings of the 19th International Conference on Data Engineering, 2003

XML Restructuring and Integration for Tabular Data.

[BibT_eX]

[DOI]

Wei Yu

Proceedings of the Database and Expert Systems Applications, 14th International Conference, 2003

2002

A Graphical Query Language: VISUAL and Its Query Processing.

[BibT_eX]

[DOI]

Nevzat Hurkan Balkir

IEEE Trans. Knowl. Data Eng., 2002

Sideway Value Algebra for Object-Relational Databases.

[BibT_eX]

[DOI]

Abdullah Al-Hamdani

Selma Ayse Özel

Özgür Ulusoy

Proceedings of 28th International Conference on Very Large Data Bases, 2002

2001

Topic-Centric Querying of Web Information Resources.

[BibT_eX]

[DOI]

Proceedings of the Database and Expert Systems Applications, 12th International Conference, 2001

2000

Vice Chair's Message.

[BibT_eX]

[DOI]

SIGMOD Rec., 2000

SIGMOD Sister Societies.

[BibT_eX]

[DOI]

Stefano Ceri

Leonid A. Kalinichenko

SIGMOD Rec., 2000

Query Processing Techniques for Multimedia Presentations.

[BibT_eX]

[DOI]

Multim. Tools Appl., 2000

Electronic Books in Digital Libraries.

[BibT_eX]

[DOI]

Proceedings of IEEE Advances in Digital Libraries 2000 (ADL 2000), 2000

1999

Indexing Large Metric Spaces for Similarity Search Queries.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 1999

Querying Multimedia Presentations Based on Content.

[BibT_eX]

[DOI]

IEEE Trans. Knowl. Data Eng., 1999

Review - Using Semi-Joins to Solve Relational Queries

[BibT_eX]

[DOI]

ACM SIGMOD Digit. Rev., 1999

A Graph Query Language and Its Query Processing.

[BibT_eX]

[DOI]

Lei Sheng

Proceedings of the 15th International Conference on Data Engineering, 1999

1998

Maintenance of Implication Integrity Constraints Under Updates to Constraints.

[BibT_eX]

[DOI]

Naci Ishakbeyoglu

VLDB J., 1998

Reminiscences on Influential Papers.

[BibT_eX]

[DOI]

SIGMOD Rec., 1998

Indexing Transaction Time Databases.

[BibT_eX]

[DOI]

Inf. Sci., 1998

Indexing Valid Time Intervals.

[BibT_eX]

[DOI]

Proceedings of the Database and Expert Systems Applications, 9th International Conference, 1998

1997

Implication and Referential Constraints: A New Formal Reasoning.

[BibT_eX]

[DOI]

IEEE Trans. Knowl. Data Eng., 1997

Report on PODS'97.

[BibT_eX]

[DOI]

SIGACT News, 1997

Distance-Based Indexing for High-Dimensional Metric Spaces.

[BibT_eX]

[DOI]

Proceedings of the SIGMOD 1997, 1997

Matching and Indexing Sequences of Different Lengths.

[BibT_eX]

[DOI]

Nasser Yazdani

Proceedings of the Sixth International Conference on Information and Knowledge Management (CIKM'97), 1997

1996

Performance of Recursive Query Processing Methods in the Presence of Cycles.

[BibT_eX]

[DOI]

Atakan Kurt

Inf. Sci., 1996

Sequence Matching of Images.

[BibT_eX]

[DOI]

Nasser Yazdani

Proceedings of the Eighth International Conference on Scientific and Statistical Database Management, 1996

A Scientific Multimedia Database System for Polymer Science Experiments.

[BibT_eX]

[DOI]

Proceedings of the Eighth International Conference on Scientific and Statistical Database Management, 1996

VISUAL: A Graphical Icon-Based Query Language.

[BibT_eX]

[DOI]

Proceedings of the Twelfth International Conference on Data Engineering, February 26, 1996

Processing OODB Queries by O-Algebra.

[BibT_eX]

[DOI]

Jie Lin

Proceedings of the CIKM '96, Proceedings of the Fifth International Conference on Information and Knowledge Management, November 12, 1996

1995

Constructing Partial and Complete Intelligent Answers for Recursive Queries.

[BibT_eX]

[DOI]

Int. J. Artif. Intell. Tools, 1995

Modeling and Quering Periodic Temporal Databases.

[BibT_eX]

Atakan Kurt

Proceedings of the 6th Int. Conf. and Workshop on Database and Expert Systems Applications, 1995

Extended Set Operators for Nested Relations and Complex Objects

[BibT_eX]

[DOI]

Eser Sükan

Proceedings of the Database and Expert Systems Applications, 1995

1994

Some Results on the Containment and Minimization of (in) Equality Queries.

[BibT_eX]

[DOI]

Inf. Process. Lett., 1994

A Framework for Feature-Based Indexing for Spatial Databases.

[BibT_eX]

[DOI]

Nasser Yazdani

Proceedings of the Seventh International Working Conference on Scientific and Statistical Database Management, 1994

A Scientific Database System for Polymers and Materials Engineering Needs.

[BibT_eX]

[DOI]

Kumar V. Vadaparty

Proceedings of the Seventh International Working Conference on Scientific and Statistical Database Management, 1994

Reasoning with Implication and Referential Constraints in Semantic Query Optimization.

[BibT_eX]

Proceedings of the ILPS 1994, 1994

Providing Semantic Intelligent Answers to Recursive Queries.

[BibT_eX]

[DOI]

Proceedings of the Sixth International Conference on Tools with Artificial Intelligence, 1994

1993

On Efficient Reasoning with Implication Constraints.

[BibT_eX]

[DOI]

Proceedings of the Deductive and Object-Oriented Databases, Third International Conference, 1993

On the Maintenance of Implication Integrity Constraints.

[BibT_eX]

[DOI]

Naci Ishakbeyoglu

Proceedings of the Database and Expert Systems Applications, 4th International Conference, 1993

1992

Design of Desirable Relational Database Schemes.

[BibT_eX]

[DOI]

J. Comput. Syst. Sci., 1992

Unifying functional and multivalued dependencies for relational database design.

[BibT_eX]

[DOI]

Inf. Sci., 1992

A Keying Method for a Nested Relational Database Management System.

[BibT_eX]

[DOI]

Jian Wang

Proceedings of the Eighth International Conference on Data Engineering, 1992

1991

LLO: An Object-Oriented Deductive Language with Methods and Method Inheritance.

[BibT_eX]

[DOI]

Yanjun Lou

Proceedings of the 1991 ACM SIGMOD International Conference on Management of Data, 1991

Meta Variables and Inheritance in an Object-Oriented Data Model.

[BibT_eX]

Yanjun Lou

Proceedings of the Proceedings of the International Conference on Database and Expert Systems Applications, 1991

1990

Letter from the Issue Editor.

[BibT_eX]

[DOI]

IEEE Data Eng. Bull., 1990

1989

Query Processing Techniques in the Summary-Table-by-Example Database Query Language.

[BibT_eX]

[DOI]

Victor Matos

ACM Trans. Database Syst., 1989

Design and Implementation of a Semantic Query Optimizer.

[BibT_eX]

[DOI]

Sreekumar T. Shenoy

IEEE Trans. Knowl. Data Eng., 1989

Synchronized Counting Method.

[BibT_eX]

[DOI]

Hussien Aly

Proceedings of the Fifth International Conference on Data Engineering, 1989

1988

Letter from the Editor.

[BibT_eX]

[DOI]

IEEE Data Eng. Bull., 1988

1987

Reduced MVDs and Minimal Covers.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 1987

A New Normal Form for Nested Relations.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 1987

Extending Relational Algebra and Relational Calculus with Set-Valued Attributes and Aggregate Functions.

[BibT_eX]

[DOI]

Victor Matos

ACM Trans. Database Syst., 1987

A System for Semantic Query Optimization.

[BibT_eX]

[DOI]

Sreekumar T. Shenoy

Proceedings of the Association for Computing Machinery Special Interest Group on Management of Data 1987 Annual Conference, 1987

Non-deterministic Modelling of Logical Queries in Deductive Databases.

[BibT_eX]

[DOI]

Hussien Aly

Proceedings of the Association for Computing Machinery Special Interest Group on Management of Data 1987 Annual Conference, 1987

Logical Design of Relational Database Systems.

[BibT_eX]

[DOI]

Proceedings of the Sixth ACM SIGACT-SIGMOD-SIGART Symposium on Principles of Database Systems, 1987

On the Normalization in Nested Relational Databases.

[BibT_eX]

[DOI]

Proceedings of the Nested Relations and Complex Objects, 1987

A Design Method for Nested Relational Databases.

[BibT_eX]

[DOI]

Proceedings of the Third International Conference on Data Engineering, 1987

1986

Notions of Dependency Preservation for Nested Relations.

[BibT_eX]

Proceedings of the XP / 7.52 Workshop on Database Theory, 1986

1985

Statistical Database Query Languages.

[BibT_eX]

[DOI]

IEEE Trans. Software Eng., 1985

A Language and a Physical Organization Technique for Summary Tables.

[BibT_eX]

[DOI]

Francisco Mata

Proceedings of the 1985 ACM SIGMOD International Conference on Management of Data, 1985

A Normal Form for Nested Relations.

[BibT_eX]

[DOI]

Proceedings of the Fourth ACM SIGACT-SIGMOD Symposium on Principles of Database Systems, 1985

A Query Language for Statistical Databases

[BibT_eX]

Proceedings of the Query Processing in Database Systems, 1985

1984

Optimization of Distributed Tree Queries.

[BibT_eX]

[DOI]

Clement T. Yu

K. Lam

J. Comput. Syst. Sci., 1984

Statistical Databases.

[BibT_eX]

[DOI]

Proceedings of the Tenth International Conference on Very Large Data Bases, 1984

On the Cyclic to Acyclic Scheme Transformation and Solving Cyclic Queries.

[BibT_eX]

[DOI]

Elarbi Choukhmane

Proceedings of the Third ACM SIGACT-SIGMOD Symposium on Principles of Database Systems, 1984

Summary-Table-By-Example: A Database Query Language for Manipulating Summary Data.

[BibT_eX]

[DOI]

Proceedings of the First International Conference on Data Engineering, 1984

1983

An Extension of Relational Algebra for Summary Tables.

[BibT_eX]

[DOI]

Proceedings of the Second International Workshop on Statistical Database Management, 1983

Features of a System for Statistical Databases.

[BibT_eX]

[DOI]

Proceedings of the Second International Workshop on Statistical Database Management, 1983

1981

Update Handling Techniques in Statistical Databases.

[BibT_eX]

[DOI]