Emre Karakoç

According to our database, Emre Karakoç authored at least 14 papers between 2004 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2023

Identification of protein-protein interaction bridges for multiple sclerosis.

Gözde Yazici, Burcu Kurt Vatandaslar, Ilknur Aydin Canturk, Fatmagul I Aydinli, Ozge Arici Duz, Emre Karakoç, Bilal Ersen Kerman, Can Alkan

Bioinform., April, 2023

2021

Blokzincir ve akıllı sözleşmelerkullanılarak yeni bir güvenliktasarımının ıot için uygulanması (Implementing a new security design for iot usingblockchain and smart contracts)

Emre Karakoç

PhD thesis, 2021

Black hole attack prevention scheme using a blockchain-block approach in SDN-enabled WSN.

Emre Karakoç, Celal Çeken

Int. J. Ad Hoc Ubiquitous Comput., 2021

2014

ORMAN: Optimal resolution of ambiguous RNA-Seq multimappings in the presence of novel isoforms.

Phuong Dao, Ibrahim Numanagic, Yen-Yi Lin, Faraz Hach, Emre Karakoç, Nilgun Donmez, Colin C. Collins, Evan E. Eichler, Süleyman Cenk Sahinalp

Bioinform., 2014

2011

Error Tolerant NMR Backbone Resonance Assignment and Automated Structure Generation.

Babak Alipanahi, Xin Gao, Emre Karakoç, Shuai Cheng Li, Frank J. Balbach, Guangyu Feng, Logan Donaldson, Ming Li

J. Bioinform. Comput. Biol., 2011

2009

PICKY: a novel SVD-based NMR spectra peak picking method.

Babak Alipanahi, Xin Gao, Emre Karakoç, Logan Donaldson, Ming Li

Bioinform., 2009

2007

Novel approaches for small biomolecule classification and structural similarity search.

Emre Karakoç, Artem Cherkasov, Süleyman Cenk Sahinalp

SIGKDD Explor., 2007

taveRNA: a web suite for RNA algorithms and applications.

Cagri Aksay, Raheleh Salari, Emre Karakoç, Can Alkan, Süleyman Cenk Sahinalp

Nucleic Acids Res., 2007

Comparative QSAR Analysis of Bacterial-, Fungalplant- and Human Metabolites.

Emre Karakoç, Süleyman Cenk Sahinalp, Artem Cherkasov

Proceedings of the Biocomputing 2007, 2007

2006

Comparative QSAR- and Fragments Distribution Analysis of Drugs, Druglikes, Metabolic Substances, and Antimicrobial Compounds.

Emre Karakoç, Süleyman Cenk Sahinalp, Artem Cherkasov

J. Chem. Inf. Model., 2006

RNA-RNA Interaction Prediction and Antisense RNA Target Search.

Can Alkan, Emre Karakoç, Joseph H. Nadeau, Süleyman Cenk Sahinalp, Kaizhong Zhang

J. Comput. Biol., 2006

RNA Secondary Structure Prediction Via Energy Density Minimization.

Can Alkan, Emre Karakoç, Süleyman Cenk Sahinalp, Peter J. Unrau, H. Alexander Ebhardt, Kaizhong Zhang, Jeremy Buhler

Proceedings of the Research in Computational Molecular Biology, 2006

Distance based algorithms for small biomolecule classification and structural similarity search.

Emre Karakoç, Artem Cherkasov, Süleyman Cenk Sahinalp

Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006

2004

Novel Approaches to Biomolecular Sequence Indexing.

Emre Karakoç, Z. Meral Özsoyoglu, Süleyman Cenk Sahinalp, Murat Tasan, Xiang Zhang

IEEE Data Eng. Bull., 2004