Zhaleh Safikhani

According to our database, Zhaleh Safikhani authored at least 8 papers between 2016 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2022

Evaluation of statistical approaches for association testing in noisy drug screening data.

Petr Smirnov, Ian Smith, Zhaleh Safikhani, Wail Ba-alawi, Farnoosh Khodakarami, Eva Lin, Yihong Yu, Scott Martin, Janosch Ortmann, Tero Aittokallio, Marc Hafner, Benjamin Haibe-Kains

BMC Bioinform., 2022

2020

Predicting drug properties with parameter-free machine learning: pareto-optimal embedded modeling (POEM).

Andrew E. Brereton, Stephen MacKinnon, Zhaleh Safikhani, Shawn Reeves, Sana Alwash, Vijay Shahani, Andreas Windemuth

Mach. Learn. Sci. Technol., 2020

Learning across label confidence distributions using Filtered Transfer Learning.

Seyed Ali Madani Tonekaboni, Andrew E. Brereton, Zhaleh Safikhani, Andreas Windemuth, Benjamin Haibe-Kains, Stephen MacKinnon

Proceedings of the 19th IEEE International Conference on Machine Learning and Applications, 2020

2018

PharmacoDB: an integrative database for mining in vitro anticancer drug screening studies.

Petr Smirnov, Victor Kofia, Alexander Maru, Mark Freeman, Chantal Ho, Nehme El-Hachem, George-Alexandru Adam, Wail Ba-alawi, Zhaleh Safikhani, Benjamin Haibe-Kains

Nucleic Acids Res., 2018

Tissue specificity of in vitro drug sensitivity.

Fupan Yao, Seyed Ali Madani Tonekaboni, Zhaleh Safikhani, Petr Smirnov, Nehme El-Hachem, Mark Freeman, Venkata Satya Kumar Manem, Benjamin Haibe-Kains

J. Am. Medical Informatics Assoc., 2018

2016

Safikhani <i>et al</i>. reply.

Zhaleh Safikhani, Nehme Hachem, Petr Smirnov, Mark Freeman, Anna Goldenberg, Nicolai J. Birkbak, Andrew H. Beck, Hugo J. W. L. Aerts, John Quackenbush, Benjamin Haibe-Kains

Nat., 2016

PharmacoGx: an R package for analysis of large pharmacogenomic datasets.

Petr Smirnov, Zhaleh Safikhani, Nehme Hachem, Dong Wang, Adrian She, Catharina Olsen, Mark Freeman, Heather Marie Selby, Deena M. A. Gendoo, Patrick Grossmann, Andrew H. Beck, Hugo J. W. L. Aerts, Mathieu Lupien, Anna Goldenberg, Benjamin Haibe-Kains

Bioinform., 2016

Public data and open source tools for multi-assay genomic investigation of disease.

Lavanya Kannan, Marcel Ramos, Angela Re, Nehme Hachem, Zhaleh Safikhani, Deena M. A. Gendoo, Sean R. Davis, David Gomez-Cabrero, Robert Castelo, Kasper D. Hansen, Vincent J. Carey, Martin Morgan, Aedín C. Culhane, Benjamin Haibe-Kains, Levi Waldron

Briefings Bioinform., 2016