Aedín C. Culhane

According to our database1, Aedín C. Culhane authored at least 20 papers between 2002 and 2016.

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Bibliography

2016
Dimension reduction techniques for the integrative analysis of multi-omics data.
Briefings Bioinform., 2016

Public data and open source tools for multi-assay genomic investigation of disease.
Briefings Bioinform., 2016

Integrative Exploratory Analysis of Two or More Genomic Datasets.
Proceedings of the Statistical Genomics - Methods and Protocols, 2016

2014
A multivariate approach to the integration of multi-omics datasets.
BMC Bioinform., 2014

2013
Significance Analysis of Prognostic Signatures.
PLoS Comput. Biol., 2013

RamiGO: an R/Bioconductor package providing an AmiGO Visualize interface.
Bioinform., 2013

2012
The Stem Cell Discovery Engine: an integrated repository and analysis system for cancer stem cell comparisons.
Nucleic Acids Res., 2012

Gene Expression Atlas update - a value-added database of microarray and sequencing-based functional genomics experiments.
Nucleic Acids Res., 2012

GeneSigDB: a manually curated database and resource for analysis of gene expression signatures.
Nucleic Acids Res., 2012

iBBiG: iterative binary bi-clustering of gene sets.
Bioinform., 2012

2011
<i>survcomp</i>: an R/Bioconductor package for performance assessment and comparison of survival models.
Bioinform., 2011

2010
GeneSigDB - a curated database of gene expression signatures.
Nucleic Acids Res., 2010

2009
AI Methods for Analyzing Microarray Data.
Proceedings of the Encyclopedia of Artificial Intelligence (3 Volumes), 2009

2007
Integrating transcription factor binding site information with gene expression datasets.
Bioinform., 2007

2006
Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data.
BMC Bioinform., 2006

2005
Optimized between-group classification: a new jackknife-based gene selection procedure for genome-wide expression data.
BMC Bioinform., 2005

MADE4: an R package for multivariate analysis of gene expression data.
Bioinform., 2005

2004
Expression Profiler: next generation - an online platform for analysis of microarray data.
Nucleic Acids Res., 2004

2003
Cross-platform comparison and visualisation of gene expression data using co-inertia analysis.
BMC Bioinform., 2003

2002
Between-group analysis of microarray data.
Bioinform., 2002


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