Zhong Wang

According to our database, Zhong Wang authored at least 19 papers between 2006 and 2026.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2026

Transforming Life Sciences with Cloud Computing and AI - Architecting an Intelligent and Trustworthy Research Ecosystem

Zhong Wang, Adrish Sannyasi, Jonathan Jiang

Springer, ISBN: 978-3-032-14221-4, 2026

2025

Genome-Factory: An Integrated Library for Tuning, Deploying, and Interpreting Genomic Models.

Weimin Wu, Xuefeng Song, Yibo Wen, Qinjie Lin, Zhihan Zhou, Jerry Yao-Chieh Hu, Zhong Wang, Han Liu

CoRR, September, 2025

DNABERT-S: pioneering species differentiation with species-aware DNA embeddings.

Zhihan Zhou, Weimin Wu, Harrison Ho, Jiayi Wang, Lizhen Shi, Ramana V. Davuluri, Zhong Wang, Han Liu

Bioinform., 2025

2024

DNABERT-S: Learning Species-Aware DNA Embedding with Genome Foundation Models.

Zhihan Zhou, Weimin Wu, Harrison Ho, Jiayi Wang, Lizhen Shi, Ramana V. Davuluri, Zhong Wang, Han Liu

CoRR, 2024

2022

Spot-on: A Checkpointing Framework for Fault-Tolerant Long-running Workloads on Cloud Spot Instances.

Ashley Tung, Haiyan Wang, Yue Li, Zhong Wang, Jingchao Sun

CoRR, 2022

Persistent memory as an effective alternative to random access memory in metagenome assembly.

Jingchao Sun, Zhining Qiu, Rob Egan, Harrison Ho, Yue Li, Zhong Wang

BMC Bioinform., 2022

Introduction to Computational Metagenomics

Zhong Wang

WorldScientific, ISBN: 9789811242489, 2022

2019

De novo Nanopore read quality improvement using deep learning.

Nathan LaPierre, Rob Egan, Wei Wang, Zhong Wang

BMC Bioinform., 2019

SpaRC: scalable sequence clustering using Apache Spark.

Lizhen Shi, Xiandong Meng, Elizabeth Tseng, Michael Mascagni, Zhong Wang

Bioinform., 2019

2018

Combining Hadoop with MPI to Solve Metagenomics Problems that are both Data- and Compute-intensive.

Han Lin, Zhichao Su, Xiandong Meng, Xu Jin, Zhong Wang, Wenting Han, Hong An, Mengxian Chi, Zheng Wu

Int. J. Parallel Program., 2018

2017

A case study of tuning MapReduce for efficient Bioinformatics in the cloud.

Lizhen Shi, Zhong Wang, Weikuan Yu, Xiandong Meng

Parallel Comput., 2017

2016

Reconstructing single genomes from complex microbial communities.

Dongwan D. Kang, Edward M. Rubin, Zhong Wang

it Inf. Technol., 2016

A Scalable Pipeline for Transcriptome Profiling Tasks with On-Demand Computing Clouds.

Shayan Shams, Nayong Kim, Xiandong Meng, Ming Tai Ha, Shantenu Jha, Zhong Wang, Joohyun Kim

Proceedings of the 2016 IEEE International Parallel and Distributed Processing Symposium Workshops, 2016

2015

Performance evaluation and tuning of BioPig for genomic analysis.

Lizhen Shi, Zhong Wang, Weikuan Yu, Xiandong Meng

Proceedings of the 2015 International Workshop on Data-Intensive Scalable Computing Systems, 2015

2013

BioPig: a Hadoop-based analytic toolkit for large-scale sequence data.

Henrik Nordberg, Karan Bhatia, Kai Wang, Zhong Wang

Bioinform., 2013

ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies.

Scott C. Clark, Rob Egan, Peter I. Frazier, Zhong Wang

Bioinform., 2013

Automatic Outlier Detection for Genome Assembly Quality Assessment.

Taghrid Samak, Rob Egan, Brian Bushnell, Daniel K. Gunter, Alex Copeland, Zhong Wang

Proceedings of the 9th IEEE International Conference on eScience, 2013

2012

Prediction of protein solubility in E. coli.

Taghrid Samak, Dan Gunter, Zhong Wang

Proceedings of the 8th IEEE International Conference on E-Science, 2012

2006

Evidence of Influence of Genomic DNA Sequence on Human X Chromosome Inactivation.

Zhong Wang, Huntington F. Willard, Sayan Mukherjee, Terrence S. Furey

PLoS Comput. Biol., 2006