Zuobai Zhang

According to our database1, Zuobai Zhang authored at least 24 papers between 2020 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Links

On csauthors.net:

Bibliography

2024
Fusing Neural and Physical: Augment Protein Conformation Sampling with Tractable Simulations.
CoRR, 2024

ProtIR: Iterative Refinement between Retrievers and Predictors for Protein Function Annotation.
CoRR, 2024

Structure-Informed Protein Language Model.
CoRR, 2024

2023
PDB-Struct: A Comprehensive Benchmark for Structure-based Protein Design.
CoRR, 2023

Enhancing Protein Language Models with Structure-based Encoder and Pre-training.
CoRR, 2023

Physics-Inspired Protein Encoder Pre-Training via Siamese Sequence-Structure Diffusion Trajectory Prediction.
CoRR, 2023

DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

Pre-Training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023

FusionRetro: Molecule Representation Fusion via In-Context Learning for Retrosynthetic Planning.
Proceedings of the International Conference on Machine Learning, 2023

Protein Representation Learning by Geometric Structure Pretraining.
Proceedings of the Eleventh International Conference on Learning Representations, 2023

2022
Biharmonic Distance-Based Performance Metric for Second-Order Noisy Consensus Networks.
IEEE Trans. Inf. Theory, 2022

Fast Approximation of Coherence for Second-Order Noisy Consensus Networks.
IEEE Trans. Cybern., 2022

Coherence Scaling of Noisy Second-Order Scale-Free Consensus Networks.
IEEE Trans. Cybern., 2022

Metro: Memory-Enhanced Transformer for Retrosynthetic Planning via Reaction Tree.
CoRR, 2022

TorchDrug: A Powerful and Flexible Machine Learning Platform for Drug Discovery.
CoRR, 2022

PEER: A Comprehensive and Multi-Task Benchmark for Protein Sequence Understanding.
Proceedings of the Advances in Neural Information Processing Systems 35: Annual Conference on Neural Information Processing Systems 2022, 2022

Neural-Symbolic Models for Logical Queries on Knowledge Graphs.
Proceedings of the International Conference on Machine Learning, 2022

Effects of Stubbornness on Opinion Dynamics.
Proceedings of the 31st ACM International Conference on Information & Knowledge Management, 2022

Structured Multi-task Learning for Molecular Property Prediction.
Proceedings of the International Conference on Artificial Intelligence and Statistics, 2022

2021
Neural Bellman-Ford Networks: A General Graph Neural Network Framework for Link Prediction.
Proceedings of the Advances in Neural Information Processing Systems 34: Annual Conference on Neural Information Processing Systems 2021, 2021

Minimizing Spectral Radius of Non-Backtracking Matrix by Edge Removal.
Proceedings of the CIKM '21: The 30th ACM International Conference on Information and Knowledge Management, Virtual Event, Queensland, Australia, November 1, 2021

2020
Power-Law Graphs Have Minimal Scaling of Kemeny Constant for Random Walks.
Proceedings of the WWW '20: The Web Conference 2020, Taipei, Taiwan, April 20-24, 2020, 2020

Nearly Linear Time Algorithm for Mean Hitting Times of Random Walks on a Graph.
Proceedings of the WSDM '20: The Thirteenth ACM International Conference on Web Search and Data Mining, 2020

Opinion Dynamics Incorporating Higher-Order Interactions.
Proceedings of the 20th IEEE International Conference on Data Mining, 2020


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