Debora S. Marks
Orcid: 0000-0001-9388-2281Affiliations:
- Harvard Medical School, Boston, MA, USA
According to our database1,
Debora S. Marks
authored at least 24 papers
between 2007 and 2023.
Collaborative distances:
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Bibliography
2023
ProteinNPT: Improving protein property prediction and design with non-parametric transformers.
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023
Proceedings of the Advances in Neural Information Processing Systems 36: Annual Conference on Neural Information Processing Systems 2023, 2023
Proceedings of the International Conference on Machine Learning, 2023
2022
Nucleic Acids Res., 2022
Non-identifiability and the Blessings of Misspecification in Models of Molecular Fitness.
Proceedings of the Advances in Neural Information Processing Systems 35: Annual Conference on Neural Information Processing Systems 2022, 2022
Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval.
Proceedings of the International Conference on Machine Learning, 2022
Optimal Design of Stochastic DNA Synthesis Protocols based on Generative Sequence Models.
Proceedings of the International Conference on Artificial Intelligence and Statistics, 2022
2021
Proceedings of the Advances in Neural Information Processing Systems 34: Annual Conference on Neural Information Processing Systems 2021, 2021
A Structured Observation Distribution for Generative Biological Sequence Prediction and Forecasting.
Proceedings of the 38th International Conference on Machine Learning, 2021
2019
Bioinform., 2019
Proceedings of the 7th International Conference on Learning Representations, 2019
2018
PLoS Comput. Biol., 2018
2017
Proceedings of the 34th International Conference on Machine Learning, 2017
2015
Inferring Pairwise Interactions from Biological Data Using Maximum-Entropy Probability Models.
PLoS Comput. Biol., 2015
2014
Structure, Dynamics and Implied Gating Mechanism of a Human Cyclic Nucleotide-Gated Channel.
PLoS Comput. Biol., 2014
FreeContact: fast and free software for protein contact prediction from residue co-evolution.
BMC Bioinform., 2014
2012
miRcode: a map of putative microRNA target sites in the long non-coding transcriptome.
Bioinform., 2012
2011
2008
2007
PLoS Comput. Biol., 2007