Agnes B. Fogo

Orcid: 0000-0003-3698-8527

According to our database1, Agnes B. Fogo authored at least 24 papers between 2018 and 2023.

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Bibliography

2023
Omni-Seg: A Scale-Aware Dynamic Network for Renal Pathological Image Segmentation.
IEEE Trans. Biomed. Eng., September, 2023

Spatial Pathomics Toolkit for Quantitative Analysis of Podocyte Nuclei with Histology and Spatial Transcriptomics Data in Renal Pathology.
CoRR, 2023

Segment Anything Model (SAM) for Digital Pathology: Assess Zero-shot Segmentation on Whole Slide Imaging.
CoRR, 2023

2022
Circle Representation for Medical Object Detection.
IEEE Trans. Medical Imaging, 2022

Compound Figure Separation of Biomedical Images: Mining Large Datasets for Self-supervised Learning.
CoRR, 2022

Omni-Seg+: A Scale-aware Dynamic Network for Pathological Image Segmentation.
CoRR, 2022

Glo-In-One: Holistic Glomerular Detection, Segmentation, and Lesion Characterization with Large-scale Web Image Mining.
CoRR, 2022

Holistic Fine-grained GGS Characterization: From Detection to Unbalanced Classification.
CoRR, 2022

Multi-contrast computed tomography healthy kidney atlas.
Comput. Biol. Medicine, 2022

Supervised deep generation of high-resolution arterial phase computed tomography kidney substructure atlas.
Proceedings of the Medical Imaging 2022: Image Processing, 2022

CircleSnake: Instance Segmentation with Circle Representation.
Proceedings of the Machine Learning in Medical Imaging - 13th International Workshop, 2022

2021
Map3D: Registration-Based Multi-Object Tracking on 3D Serial Whole Slide Images.
IEEE Trans. Medical Imaging, 2021

Renal cortex, medulla and pelvicaliceal system segmentation on arterial phase CT images with random patch-based networks.
Proceedings of the Medical Imaging 2021: Image Processing, Online, February 15-19, 2021, 2021

Improve global glomerulosclerosis classification with imbalanced data using CircleMix augmentation.
Proceedings of the Medical Imaging 2021: Image Processing, Online, February 15-19, 2021, 2021

Construction of a multi-phase contrast computed tomography kidney atlas.
Proceedings of the Medical Imaging 2021: Image Processing, Online, February 15-19, 2021, 2021

Compound Figure Separation of Biomedical Images with Side Loss.
Proceedings of the Deep Generative Models, and Data Augmentation, Labelling, and Imperfections, 2021

Beds: Bagging Ensemble Deep Segmentation For Nucleus Segmentation With Testing Stage Stain Augmentation.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

2020
Instance Segmentation for Whole Slide Imaging: End-to-End or Detect-Then-Segment.
CoRR, 2020

CircleNet: Anchor-free Detection with Circle Representation.
CoRR, 2020

Neural Network Segmentation of Interstitial Fibrosis, Tubular Atrophy, and Glomerulosclerosis in Renal Biopsies.
CoRR, 2020

EasierPath: An Open-Source Tool for Human-in-the-Loop Deep Learning of Renal Pathology.
Proceedings of the Interpretable and Annotation-Efficient Learning for Medical Image Computing, 2020

CircleNet: Anchor-Free Glomerulus Detection with Circle Representation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

2019
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program.
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Nat., 2019

2018
Computational analysis of the structural progression of human glomeruli in diabetic nephropathy.
Proceedings of the Medical Imaging 2018: Digital Pathology, 2018


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