Aïda Ouangraoua
Orcid: 0000-0002-2040-4948Affiliations:
- University of Sherbrooke, Canada
- INRIA, France (former)
According to our database1,
Aïda Ouangraoua
authored at least 45 papers
between 2007 and 2024.
Collaborative distances:
Collaborative distances:
Timeline
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Bibliography
2024
2023
Proceedings of the Comparative Genomics - 20th International Conference, 2023
2021
OpenProt 2021: deeper functional annotation of the coding potential of eukaryotic genomes.
Nucleic Acids Res., 2021
DoubleRecViz: a web-based tool for visualizing transcript-gene-species tree reconciliation.
Bioinform., 2021
Bioinform., 2021
2019
IEEE ACM Trans. Comput. Biol. Bioinform., 2019
OpenProt: a more comprehensive guide to explore eukaryotic coding potential and proteomes.
Nucleic Acids Res., 2019
SimSpliceEvol: alternative splicing-aware simulation of biological sequence evolution.
BMC Bioinform., 2019
SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups.
BMC Bioinform., 2019
2018
IEEE ACM Trans. Comput. Biol. Bioinform., 2018
aliFreeFold: an alignment-free approach to predict secondary structure from homologous RNA sequences.
Bioinform., 2018
2017
Reconstructing protein and gene phylogenies using reconciliation and soft-clustering.
J. Bioinform. Comput. Biol., 2017
Improving spliced alignment for identification of ortholog groups and multiple CDS alignment.
CoRR, 2017
Algorithms Mol. Biol., 2017
A General Framework for Gene Tree Correction Based on Duplication-Loss Reconciliation.
Proceedings of the 17th International Workshop on Algorithms in Bioinformatics, 2017
2016
CoRR, 2016
Reconstructing protein and gene phylogenies by extending the framework of reconciliation.
CoRR, 2016
Proceedings of the Bioinformatics Research and Applications - 12th International Symposium, 2016
2015
BMC Bioinform., December, 2015
Reconstructing the history of a WD40 beta-propeller tandem repeat using a phylogenetically informed algorithm.
PeerJ Comput. Sci., 2015
CoRR, 2015
2014
On the Identification of Conflicting Contiguities in Ancestral Genome Reconstruction.
J. Comput. Biol., 2014
2012
Adv. Bioinformatics, 2012
Proceedings of the Algorithms in Bioinformatics - 12th International Workshop, 2012
Proceedings of the Bioinformatics Research and Applications - 8th International Symposium, 2012
Proceedings of the Combinatorial Pattern Matching - 23rd Annual Symposium, 2012
Proceedings of the Biomedical Engineering Systems and Technologies, 2012
Genome Halving by Block Interchange.
Proceedings of the BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Vilamoura, Algarve, Portugal, 1, 2012
2011
A new algorithm for aligning nested arc-annotated sequences under arbitrary weight schemes.
Theor. Comput. Sci., 2011
J. Comput. Biol., 2011
2010
Yeast Ancestral Genome Reconstructions: The Possibilities of Computational Methods II.
J. Comput. Biol., 2010
An Approximation Algorithm for Computing a Parsimonious First Speciation in the Gene Duplication Model.
Proceedings of the Comparative Genomics - International Workshop, 2010
Proceedings of the Comparative Genomics - International Workshop, 2010
2009
Theor. Comput. Sci., 2009
J. Discrete Algorithms, 2009
A 3-approximation algorithm for computing a parsimonious first speciation in the gene duplication model
CoRR, 2009
Proceedings of the Comparative Genomics, International Workshop, 2009
Proceedings of the Bioinformatics Research and Applications, 5th International Symposium, 2009
2007