Alexander V. Alekseyenko
Orcid: 0000-0002-5748-2085
According to our database1,
Alexander V. Alekseyenko
authored at least 31 papers
between 2007 and 2024.
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Bibliography
2024
Enabling the clinical application of artificial intelligence in genomics: a perspective of the AMIA Genomics and Translational Bioinformatics Workgroup.
J. Am. Medical Informatics Assoc., January, 2024
2023
Not all phenotypes are created equal: covariates of success in e-phenotype specification.
J. Am. Medical Informatics Assoc., January, 2023
Online algorithm for assignment of specimens to pooled or individual testing using risk models provides a practical way to increase testing capacity.
F1000Research, 2023
2022
Proceedings of the AMIA 2022, 2022
2021
Natural language processing enabling COVID-19 predictive analytics to support data-driven patient advising and pooled testing.
J. Am. Medical Informatics Assoc., 2021
Each patient is a research biorepository: informatics-enabled research on surplus clinical specimens via the living BioBank.
J. Am. Medical Informatics Assoc., 2021
A deep learning segmentation strategy that minimizes the amount of manually annotated images.
F1000Research, 2021
Natural Language Processing and COVID-19 Predictive Analytics to Enable and Optimize SARS-CoV-2 Pooled Testing.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021
2020
Actionable Opportunities for Improving Opioid Prescribing through Use of Informatics.
Proceedings of the AMIA 2020, 2020
Informatics Challenges of COVID-19 Crisis: A Comprehensive Response from An Academic Health System.
Proceedings of the AMIA 2020, 2020
Informatics Architecture for Phenotyped Microbiome Data Generation from Just-in-Time Clinical Microbiology Specimens from CTSA Network Producers.
Proceedings of the AMIA 2020, 2020
2019
Actionable opportunities for improving knowledge at intersectionof dental and medical data.
Proceedings of the AMIA 2019, 2019
Simulation Study of Just-in-Time Specimen Recruitment from University-Wide e-Phenotypes of Interest.
Proceedings of the AMIA 2019, 2019
Proceedings of the AMIA 2019, 2019
2018
Comput. Methods Programs Biomed., 2018
The Hidden Microbiome Pipeline: Providing Access to Clinical Microbiome Specimens, Sequences, and Informatics Resources.
Proceedings of the AMIA 2018, 2018
2017
A general framework for association analysis of microbial communities on a taxonomic tree.
Bioinform., 2017
Proceedings of the AMIA 2017, 2017
Proceedings of the AMIA 2017, 2017
2016
PERMANOVA-S: association test for microbial community composition that accommodates confounders and multiple distances.
Bioinform., 2016
Comprehensive Evaluation of Univariate and Multivariate Distributions for Machine Learning With Microbiome Data.
Proceedings of the AMIA 2016, 2016
Proceedings of the AMIA 2016, 2016
Proceedings of the AMIA 2016, 2016
2011
Visualization and Statistical Comparisons of Microbial Communities Using R Packages on Phylochip Data.
Proceedings of the Biocomputing 2011: Proceedings of the Pacific Symposium, 2011
2009
Accurate Stochastic Simulation via the Step Anticipation <i>τ</i>-Leaping (SAL) Algorithm.
J. Comput. Biol., 2009
2007
The ASAP II database: analysis and comparative genomics of alternative splicing in 15 animal species.
Nucleic Acids Res., 2007
Nested Containment List (NCList): a new algorithm for accelerating interval query of genome alignment and interval databases.
Bioinform., 2007