Andrzej Kloczkowski

Orcid: 0000-0003-1002-5095

According to our database1, Andrzej Kloczkowski authored at least 36 papers between 2004 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2023
Structural Analysis of RNA-Binding Protein EWSR1 Involved in Ewing's Sarcoma Through Domain Assembly and Conformational Molecular Dynamics Studies.
Proceedings of the Bioinformatics and Biomedical Engineering, 2023

Pharmacoinformatic Analysis of Drug Leads for Alzheimer's Disease from FDA-Approved Dataset Through Drug Repositioning Studies.
Proceedings of the Bioinformatics and Biomedical Engineering, 2023

Prediction of Functional Effects of Protein Amino Acid Mutations.
Proceedings of the Bioinformatics and Biomedical Engineering, 2023

Computational Models for COVID-19 Dynamics Prediction.
Proceedings of the Artificial Intelligence and Soft Computing, 2023

2022
Analysis of transcriptomic responses to SARS-CoV-2 reveals plausible defective pathways responsible for increased susceptibility to infection and complications and helps to develop fast-track repositioning of drugs against COVID-19.
Comput. Biol. Medicine, 2022

2021
DescribePROT: database of amino acid-level protein structure and function predictions.
Nucleic Acids Res., 2021

A Hybrid Levenberg-Marquardt Algorithm on a Recursive Neural Network for Scoring Protein Models.
Proceedings of the Artificial Neural Networks - Third Edition., 2021

2020
Identification of an Epidemiological Model to Simulate the COVID-19 Epidemic Using Robust Multiobjective Optimization and Stochastic Fractal Search.
Comput. Math. Methods Medicine, 2020

Many-to-One Binding by Intrinsically Disordered Protein Regions.
Proceedings of the Pacific Symposium on Biocomputing 2020, 2020

The Utilization of Different Classifiers to Perform Drug Repositioning in Inclusion Body Myositis Supports the Concept of Biological Invariance.
Proceedings of the Artificial Intelligence and Soft Computing, 2020

2019
Entropy, Fluctuations, and Disordered Proteins.
Entropy, 2019

Characteristics of Protein Fold Space Exhibits Close Dependence on Domain Usage.
Proceedings of the Bioinformatics and Biomedical Engineering, 2019

Deciphering General Characteristics of Residues Constituting Allosteric Communication Paths.
Proceedings of the Bioinformatics and Biomedical Engineering, 2019

2018
Principal component analysis in protein tertiary structure prediction.
J. Bioinform. Comput. Biol., 2018

Protein Tertiary Structure Prediction via SVD and PSO Sampling.
Proceedings of the Bioinformatics and Biomedical Engineering, 2018

On the Use of Principal Component Analysis and Particle Swarm Optimization in Protein Tertiary Structure Prediction.
Proceedings of the Artificial Intelligence and Soft Computing, 2018

2016
Predicting Designability of Small Proteins from Graph Features of Contact Maps.
J. Comput. Biol., 2016

Protein secondary structure prediction using a small training set (compact model) combined with a Complex-valued neural network approach.
BMC Bioinform., 2016

Fold-specific sequence scoring improves protein sequence matching.
BMC Bioinform., 2016

2015
Multi-class BCGA-ELM based classifier that identifies biomarkers associated with hallmarks of cancer.
BMC Bioinform., 2015

Exploration of Designability of Proteins Using Graph Features of Contact Maps: Beyond Lattice Models.
Proceedings of the Research in Computational Molecular Biology, 2015

2014
BioShell-Threading: versatile Monte Carlo package for protein 3D threading.
BMC Bioinform., 2014

2013
Detection of onset of Alzheimer's disease from MRI images using a GA-ELM-PSO classifier.
Proceedings of the 2013 Fourth International Workshop on Computational Intelligence in Medical Imaging, 2013

2012
P.R.E.S.S. - an R-package for Exploring Residual-Level protein Structural Statistics.
J. Bioinform. Comput. Biol., 2012

2011
MAVEN: Motion Analysis and Visualization of Elastic Networks and Structural Ensembles.
BMC Bioinform., 2011

Particle Swarm Optimization: A Powerful Family of Stochastic Optimizers. Analysis, Design and Application to Inverse Modelling.
Proceedings of the Advances in Swarm Intelligence - Second International Conference, 2011

2010
Potentials 'R'Us web-server for protein energy estimations with coarse-grained knowledge-based potentials.
BMC Bioinform., 2010

An Extreme Learning Machine Classifier for Prediction of Relative Solvent Accessibility in Proteins.
Proceedings of the ICFC-ICNC 2010, 2010

Protein Secondary Structure Prediction using Knowledge-based Potentials.
Proceedings of the ICFC-ICNC 2010, 2010

Immunoglobulin functional motions and their effects on the complementarity determining regions.
Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

Immunological implications of a structural analysis of two different porcine IL1β proteins expressed in macrophages and embryos.
Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

2008
Use of machine learning algorithms to classify binary protein sequences as highly-designable or poorly-designable.
BMC Bioinform., 2008

2007
Consensus Data Mining (CDM) Protein Secondary Structure Prediction Server: Combining GOR V and Fragment Database Mining (FDM).
Bioinform., 2007

2006
Functional clustering of yeast proteins from the protein-protein interaction network.
BMC Bioinform., 2006

2005
GOR V server for protein secondary structure prediction.
Bioinform., 2005

2004
Predicting binding sites of hydrolase-inhibitor complexes by combining several methods.
BMC Bioinform., 2004


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