Johannes Söding
Orcid: 0000-0001-9642-8244Affiliations:
- Max Planck Institute for Biophysical Chemistry, Göttingen, Germany
According to our database1,
Johannes Söding
authored at least 33 papers
between 2003 and 2021.
Collaborative distances:
Collaborative distances:
Timeline
Legend:
Book In proceedings Article PhD thesis Dataset OtherLinks
Online presence:
-
on orcid.org
On csauthors.net:
Bibliography
2021
DescribePROT: database of amino acid-level protein structure and function predictions.
Nucleic Acids Res., 2021
SpacePHARER: sensitive identification of phages from CRISPR spacers in prokaryotic hosts.
Bioinform., 2021
Thermodynamic modeling reveals widespread multivalent binding by RNA-binding proteins.
Bioinform., 2021
2019
BMC Bioinform., 2019
PROSSTT: probabilistic simulation of single-cell RNA-seq data for complex differentiation processes.
Bioinform., 2019
Bioinform., 2019
2018
Synthetic protein alignments by CCMgen quantify noise in residue-residue contact prediction.
PLoS Comput. Biol., 2018
Nucleic Acids Res., 2018
2017
Uniclust databases of clustered and deeply annotated protein sequences and alignments.
Nucleic Acids Res., 2017
Bioinform., 2017
2016
The MPI bioinformatics Toolkit as an integrative platform for advanced protein sequence and structure analysis.
Nucleic Acids Res., 2016
MMseqs software suite for fast and deep clustering and searching of large protein sequence sets.
Bioinform., 2016
2015
Automatic Prediction of Protein 3D Structures by Probabilistic Multi-template Homology Modeling.
PLoS Comput. Biol., 2015
Context similarity scoring improves protein sequence alignments in the midnight zone.
Bioinform., 2015
Bioinform., 2015
2014
CCMpred - fast and precise prediction of protein residue-residue contacts from correlated mutations.
Bioinform., 2014
2013
BMC Bioinform., 2013
2012
The XXmotif web server for eXhaustive, weight matriX-based motif discovery in nucleotide sequences.
Nucleic Acids Res., 2012
Bioinform., 2012
2009
Nucleic Acids Res., 2009
Phospholipid scramblases and Tubby-like proteins belong to a new superfamily of membrane tethered transcription factors.
Bioinform., 2009
2008
Prediction of protein functional residues from sequence by probability density estimation.
Bioinform., 2008
<i>De novo</i> identification of highly diverged protein repeats by probabilistic consistency.
Bioinform., 2008
2007
TPRpred: a tool for prediction of TPR-, PPR- and SEL1-like repeats from protein sequences.
BMC Bioinform., 2007
2006
Nucleic Acids Res., 2006
Nucleic Acids Res., 2006
Nucleic Acids Res., 2006
2005
The HHpred interactive server for protein homology detection and structure prediction.
Nucleic Acids Res., 2005
Nucleic Acids Res., 2005
2003
0n the Evolution of Proteins from Peptides(Invited Talk).
Proceedings of the German Conference on Bioinformatics, 2003