John Ashburner

Orcid: 0000-0001-7605-2518

According to our database1, John Ashburner authored at least 97 papers between 2001 and 2023.

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Bibliography

2023
Equitable modelling of brain imaging by counterfactual augmentation with morphologically constrained 3D deep generative models.
Medical Image Anal., 2023

Large-kernel Attention for Efficient and Robust Brain Lesion Segmentation.
CoRR, 2023

Deep Variational Lesion-Deficit Mapping.
CoRR, 2023

2022
A hierarchical Bayesian model to find brain-behaviour associations in incomplete data sets.
NeuroImage, 2022

Fitting Segmentation Networks on Varying Image Resolutions Using Splatting.
Proceedings of the Medical Image Understanding and Analysis - 26th Annual Conference, 2022

2021
Uncertainty analysis of MR-PET image registration for precision neuro-PET imaging.
NeuroImage, 2021

Ventralis intermedius nucleus anatomical variability assessment by MRI structural connectivity.
NeuroImage, 2021

Model-based multi-parameter mapping.
Medical Image Anal., 2021

Factorisation-based Image Labelling.
CoRR, 2021

Correcting inter-scan motion artefacts in quantitative R1 mapping at 7T.
CoRR, 2021

An MRF-UNet Product of Experts for Image Segmentation.
Proceedings of the Medical Imaging with Deep Learning, 7-9 July 2021, Lübeck, Germany., 2021

2020
The influence of microsatellite polymorphisms in sex steroid receptor genes ESR1, ESR2 and AR on sex differences in brain structure.
NeuroImage, 2020

A Symmetric Prior for the Regularisation of Elastic Deformations: Improved anatomical plausibility in nonlinear image registration.
NeuroImage, 2020

An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE).
Proceedings of the Biomedical Image Registration - 9th International Workshop, 2020

Groupwise Multimodal Image Registration Using Joint Total Variation.
Proceedings of the Medical Image Understanding and Analysis - 24th Annual Conference, 2020

Flexible Bayesian Modelling for Nonlinear Image Registration.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Joint Total Variation ESTATICS for Robust Multi-parameter Mapping.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

2019
hMRI - A toolbox for quantitative MRI in neuroscience and clinical research.
NeuroImage, 2019

An algorithm for learning shape and appearance models without annotations.
Medical Image Anal., 2019

A modality-adaptive method for segmenting brain tumors and organs-at-risk in radiation therapy planning.
Medical Image Anal., 2019

A Tool for Super-Resolving Multimodal Clinical MRI.
CoRR, 2019

Bayesian Volumetric Autoregressive Generative Models for Better Semisupervised Learning.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Empirical Bayesian Mixture Models for Medical Image Translation.
Proceedings of the Simulation and Synthesis in Medical Imaging, 2019

Nonlinear Markov Random Fields Learned via Backpropagation.
Proceedings of the Information Processing in Medical Imaging, 2019

2018
A comparison of various MRI feature types for characterizing whole brain anatomical differences using linear pattern recognition methods.
NeuroImage, 2018

Generative diffeomorphic modelling of large MRI data sets for probabilistic template construction.
NeuroImage, 2018

Sparse PLS hyper-parameters optimisation for investigating brain-behaviour relationships.
Proceedings of the 2018 International Workshop on Pattern Recognition in Neuroimaging, 2018

MRI Super-Resolution Using Multi-channel Total Variation.
Proceedings of the Medical Image Understanding and Analysis - 22nd Conference, 2018

Diffeomorphic Brain Shape Modelling Using Gauss-Newton Optimisation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

2017
Multivariate dynamical modelling of structural change during development.
NeuroImage, 2017

Spinal cord grey matter segmentation challenge.
NeuroImage, 2017

OpenNFT: An open-source Python/Matlab framework for real-time fMRI neurofeedback training based on activity, connectivity and multivariate pattern analysis.
NeuroImage, 2017

Subthalamic deep brain stimulation sweet spots and hyperdirect cortical connectivity in Parkinson's disease.
NeuroImage, 2017

Generative diffeomorphic atlas construction from brain and spinal cord MRI data.
CoRR, 2017

2016
New tissue priors for improved automated classification of subcortical brain structures on MRI.
NeuroImage, 2016

Variational inference for medical image segmentation.
Comput. Vis. Image Underst., 2016

2015
Accurate automatic estimation of total intracranial volume: A nuisance variable with less nuisance.
NeuroImage, 2015

Do we need to revise the tripartite subdivision hypothesis of the human subthalamic nucleus (STN)? Response to Alkemade and Forstmann.
NeuroImage, 2015

A Comparison of Strategies for Incorporating Nuisance Variables into Predictive Neuroimaging Models.
Proceedings of the 2015 International Workshop on Pattern Recognition in NeuroImaging, 2015

Multivariate Effect Ranking via Adaptive Sparse PLS.
Proceedings of the 2015 International Workshop on Pattern Recognition in NeuroImaging, 2015

Improving MRI Brain Image Classification with Anatomical Regional Kernels.
Proceedings of the Machine Learning Meets Medical Imaging - First International Workshop, 2015

2014
A Standardized [18F]-FDG-PET Template for Spatial Normalization in Statistical Parametric Mapping of Dementia.
Neuroinformatics, 2014

Disentangling in vivo the effects of iron content and atrophy on the ageing human brain.
NeuroImage, 2014

An Oblique Approach to Prediction of Conversion to Alzheimer's Disease with Multikernel Gaussian Processes.
Proceedings of the Machine Learning and Interpretation in Neuroimaging, 2014

Leveraging Clinical Data to Enhance Localization of Brain Atrophy.
Proceedings of the Machine Learning and Interpretation in Neuroimaging, 2014

2013
PRoNTo: Pattern Recognition for Neuroimaging Toolbox.
Neuroinformatics, 2013

Multivariate decoding of brain images using ordinal regression.
NeuroImage, 2013

Wrapper Methods to Correct Mislabelled Training Data.
Proceedings of the International Workshop on Pattern Recognition in Neuroimaging, 2013

2012
Confirmation of functional zones within the human subthalamic nucleus: Patterns of connectivity and sub-parcellation using diffusion weighted imaging.
NeuroImage, 2012

SPM: A history.
NeuroImage, 2012

Data sharing in neuroimaging research.
Frontiers Neuroinformatics, 2012

Parametric non-rigid registration using a stationary velocity field.
Proceedings of the 2012 IEEE Workshop on Mathematical Methods in Biomedical Image Analysis, 2012

Classification of Alzheimer's disease patients and controls with Gaussian processes.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

2011
Unified segmentation based correction of R1 brain maps for RF transmit field inhomogeneities (UNICORT).
NeuroImage, 2011

Regional specificity of MRI contrast parameter changes in normal ageing revealed by voxel-based quantification (VBQ).
NeuroImage, 2011

Kernel regression for fMRI pattern prediction.
NeuroImage, 2011

Utilizing temporal information in fMRI decoding: Classifier using kernel regression methods.
NeuroImage, 2011

Multivariate models of inter-subject anatomical variability.
NeuroImage, 2011

Diffeomorphic registration using geodesic shooting and Gauss-Newton optimisation.
NeuroImage, 2011

Measuring the Consistency of Global Functional Connectivity Using Kernel Regression Methods.
Proceedings of the 2011 International Workshop on Pattern Recognition in NeuroImaging, 2011

Log-Euclidean free-form deformation.
Proceedings of the Medical Imaging 2011: Image Processing, 2011

2010
Normal variation in fronto-occipital circuitry and cerebellar structure with an autism-associated polymorphism of CNTNAP2.
NeuroImage, 2010

Predicting clinical scores from magnetic resonance scans in Alzheimer's disease.
NeuroImage, 2010

2009
Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration.
NeuroImage, 2009

A comparison between voxel-based cortical thickness and voxel-based morphometry in normal aging.
NeuroImage, 2009

Improved segmentation of deep brain grey matter structures using magnetization transfer (MT) parameter maps.
NeuroImage, 2009

Genotype-phenotype interactions in primary dystonias revealed by differential changes in brain structure.
NeuroImage, 2009

Computing average shaped tissue probability templates.
NeuroImage, 2009

2008
Dynamic Positron Emission Tomography Data-Driven Analysis Using Sparse Bayesian Learning.
IEEE Trans. Medical Imaging, 2008

Interpreting scan data acquired from multiple scanners: A study with Alzheimer's disease.
NeuroImage, 2008

Combining multivariate voxel selection and support vector machines for mapping and classification of fMRI spatial patterns.
NeuroImage, 2008

Voxel-based cortical thickness measurements in MRI.
NeuroImage, 2008

Bayesian decoding of brain images.
NeuroImage, 2008

fMRI Activity Patterns in Human LOC Carry Information about Object Exemplars within Category.
J. Cogn. Neurosci., 2008

Kernel methods for fMRI pattern prediction.
Proceedings of the International Joint Conference on Neural Networks, 2008

2007
Diffusion-based spatial priors for imaging.
NeuroImage, 2007

Variational free energy and the Laplace approximation.
NeuroImage, 2007

Spatial normalization of lesioned brains: Performance evaluation and impact on fMRI analyses.
NeuroImage, 2007

A tensor based morphometry study of longitudinal gray matter contraction in FTD.
NeuroImage, 2007

A fast diffeomorphic image registration algorithm.
NeuroImage, 2007

2005
Unified segmentation.
NeuroImage, 2005

2004
Generative and recognition models for neuroanatomy.
NeuroImage, 2004

2003
Modeling regional and psychophysiologic interactions in fMRI: the importance of hemodynamic deconvolution.
NeuroImage, 2003

Changes in cerebral morphology consequent to peripheral autonomic denervation.
NeuroImage, 2003

How to correct susceptibility distortions in spin-echo echo-planar images: application to diffusion tensor imaging.
NeuroImage, 2003

2002
Distributional Assumptions in Voxel-Based Morphometry.
NeuroImage, 2002

The Precision of Anatomical Normalization in the Medial Temporal Lobe Using Spatial Basis Functions.
NeuroImage, 2002

Image Distortion Correction in fMRI: A Quantitative Evaluation.
NeuroImage, 2002

Automatic Differentiation of Anatomical Patterns in the Human Brain: Validation with Studies of Degenerative Dementias.
NeuroImage, 2002

Classical and Bayesian Inference in Neuroimaging: Theory.
NeuroImage, 2002

Classical and Bayesian Inference in Neuroimaging: Applications.
NeuroImage, 2002

Inter Subject Registration of Functional and Anatomical Data Using SPM.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2002

2001
Learning Arbitrary Visuomotor Associations: Temporal Dynamic of Brain Activity.
NeuroImage, 2001

Cerebral Asymmetry and the Effects of Sex and Handedness on Brain Structure: A Voxel-Based Morphometric Analysis of 465 Normal Adult Human Brains.
NeuroImage, 2001

A Voxel-Based Morphometric Study of Ageing in 465 Normal Adult Human Brains.
NeuroImage, 2001

Spatial Normalization of Brain Images with Focal Lesions Using Cost Function Masking.
NeuroImage, 2001

Why Voxel-Based Morphometry Should Be Used.
NeuroImage, 2001


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