Carlo Colantuoni

According to our database, Carlo Colantuoni authored at least 8 papers between 2002 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

The Neuroscience Multi-Omic Archive: a BRAIN Initiative resource for single-cell transcriptomic and epigenomic data from the mammalian brain.

Seth A. Ament, Ricky S. Adkins, Robert Carter, Elena Chrysostomou, Carlo Colantuoni, Jonathan Crabtree, Heather Huot Creasy, Kylee Degatano, Victor Felix, Peter Gandt, Gwenn a Garden, Michelle G. Giglio, Brian R. Herb, Farzaneh Khajouei, Elizabeth Kiernan, Carrie McCracken, Kennedy McDaniel, Suvarna Nadendla, Lance Nickel, Dustin Olley, Joshua Orvis, Joseph P. Receveur, Mike Schor, Shreyash Sonthalia, Timothy L. Tickle, Jessica Way, Ronna Hertzano, Anup A. Mahurkar, Owen R. White

Nucleic Acids Res., January, 2023

2022

Identifying enhancer properties associated with genetic risk for complex traits using regulome-wide association studies.

Alex M. Casella, Carlo Colantuoni, Seth A. Ament

PLoS Comput. Biol., September, 2022

2021

Eliminating accidental deviations to minimize generalization error and maximize replicability: Applications in connectomics and genomics.

Eric W. Bridgeford, Shangsi Wang, Zeyi Wang, Ting Xu, R. Cameron Craddock, Jayanta Dey, Gregory Kiar, William R. Gray Roncal, Carlo Colantuoni, Christopher Douville, Stephanie Noble, Carey E. Priebe, Brian Caffo, Michael P. Milham, Xi-Nian Zuo, Joshua T. Vogelstein

PLoS Comput. Biol., 2021

2020

projectR: an R/Bioconductor package for transfer learning via PCA, NMF, correlation and clustering.

Gaurav Sharma, Carlo Colantuoni, Loyal A. Goff, Elana J. Fertig, Genevieve L. Stein-O'Brien

Bioinform., 2020

2017

PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF.

Genevieve L. Stein-O'Brien, Jacob L. Carey, Waishing Lee, Michael Considine, Alexander V. Favorov, Emily Flam, Theresa Guo, Sijia Li, Luigi Marchionni, Thomas Sherman, Shawn Sivy, Daria A. Gaykalova, Ronald McKay, Michael F. Ochs, Carlo Colantuoni, Elana J. Fertig

Bioinform., 2017

2016

Erratum to: Practical impacts of genomic data "cleaning" on biological discovery using surrogate variable analysis.

Andrew E. Jaffe, Thomas Hyde, Joel Kleinman, Daniel R. Weinberger, Joshua Chenoweth, Ronald McKay, Jeffrey T. Leek, Carlo Colantuoni

BMC Bioinform., 2016

2015

Practical impacts of genomic data "cleaning" on biological discovery using surrogate variable analysis.

Andrew E. Jaffe, Thomas Hyde, Joel Kleinman, Daniel Weinbergern, Joshua Chenoweth, Ronald McKay, Jeffrey T. Leek, Carlo Colantuoni

BMC Bioinform., 2015

2002

SNOMAD (Standardization and NOrmalization of MicroArray Data): web-accessible gene expression data analysis.

Carlo Colantuoni, George Henry, Scott Zeger, Jonathan Pevsner

Bioinform., 2002