Chunyu Liu

Orcid: 0000-0002-5986-4415

Affiliations:
  • University of Illinois at Chicago, Department of Psychiatry, IL, USA


According to our database1, Chunyu Liu authored at least 20 papers between 2003 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
CAM3.0: determining cell type composition and expression from bulk tissues with fully unsupervised deconvolution.
Bioinform., March, 2024

2022
swCAM: estimation of subtype-specific expressions in individual samples with unsupervised sample-wise deconvolution.
Bioinform., 2022

2017
Multi-Block Bipartite Graph for Integrative Genomic Analysis.
IEEE ACM Trans. Comput. Biol. Bioinform., 2017

Integration of multi-omics data for integrative gene regulatory network inference.
Int. J. Data Min. Bioinform., 2017

Identifying cis/trans-acting expression quantitative trait loci (eQTL).
Int. J. Data Min. Bioinform., 2017

2016
Integrative Gene Regulatory Network inference using multi-omics data.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

2015
eQTL epistasis: detecting epistatic effects and inferring hierarchical relationships of genes in biological pathways.
Bioinform., 2015

Integrative approach for inference of gene regulatory networks using lasso-based random featuring and application to Psychiatric disorders.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

An integrative genomic study for multimodal genomic data using multi-block bipartite graph.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014
Integration of DNA Methylation, Copy Number Variation, and Gene Expression for Gene Regulatory Network Inference and Application to Psychiatric Disorders.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Bioengineering, 2014

Multi-block and Multi-task Learning for Integrative Genomic Study.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Bioengineering, 2014

2013
eQTL Mapping Study via Regularized Sparse Canonical Correlation Analysis.
Proceedings of the 12th International Conference on Machine Learning and Applications, 2013

Sparse generalized canonical correlation analysis for biological model integration: A genetic study of psychiatric disorders.
Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2013

Inference of gene regulatory networks by integrating gene expressions and genetic perturbations.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

eQTL epistasis: Detecting complex interaction effects between multiple loci from eQTL data.
Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2010
Definition and analysis of SNP-free regions of current genome wide association study databases.
Proceedings of the Fifth International Conference on Bio-Inspired Computing: Theories and Applications, 2010

2006
MutScreener: primer design tool for PCR-direct sequencing.
Nucleic Acids Res., 2006

2005
SNP Cutter: a comprehensive tool for SNP PCR-RFLP assay design.
Nucleic Acids Res., 2005

2004
Frequency Finder: a multi-source web application for collection of public allele frequencies of SNP markers.
Bioinform., 2004

2003
DNannotator: annotation software tool kit for regional genomic sequences.
Nucleic Acids Res., 2003


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