David M. Herrington

According to our database, David M. Herrington authored at least 13 papers between 1999 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

CAM3.0: determining cell type composition and expression from bulk tissues with fully unsupervised deconvolution.

Chiung-Ting Wu, Dongping Du, Lulu Chen, Rujia Dai, Chunyu Liu, Guoqiang Yu, Saurabh Bhardwaj, Sarah J. Parker, Zhen Zhang, Robert Clarke, David M. Herrington, Yue Wang

Bioinform., March, 2024

2023

GenoCraft: A Comprehensive, User-Friendly Web-Based Platform for High-Throughput Omics Data Analysis and Visualization.

Yingzhou Lu, Minjie Shen, Yue Zhao, Chenhao Li, Fan Meng, Xiao Wang, David M. Herrington, Yue Wang, Tim Fu, Capucine Van Rechem

CoRR, 2023

2022

swCAM: estimation of subtype-specific expressions in individual samples with unsupervised sample-wise deconvolution.

Lulu Chen, Chiung-Ting Wu, Chia-Hsiang Lin, Rujia Dai, Chunyu Liu, Robert Clarke, Guoqiang Yu, Jennifer E. Van Eyk, David M. Herrington, Yue Wang

Bioinform., 2022

2021

Machine intelligence enabled radiomics.

Yue Wang, David M. Herrington

Nat. Mach. Intell., 2021

2020

Targeted realignment of LC-MS profiles by neighbor-wise compound-specific graphical time warping with misalignment detection.

Chiung-Ting Wu, Yizhi Wang, Yinxue Wang, Timothy M. D. Ebbels, Ibrahim Karaman, Gonçalo Graça, Rui Pinto, David M. Herrington, Yue Wang, Guoqiang Yu

Bioinform., 2020

debCAM: a bioconductor R package for fully unsupervised deconvolution of complex tissues.

Lulu Chen, Chiung-Ting Wu, Niya Wang, David M. Herrington, Robert Clarke, Yue Wang

Bioinform., 2020

2015

KDDN: an open-source Cytoscape app for constructing differential dependency networks with significant rewiring.

Ye Tian, Bai Zhang, Eric P. Hoffman, Robert Clarke, Zhen Zhang, Ie-Ming Shih, Jianhua Xuan, David M. Herrington, Yue Joseph Wang

Bioinform., 2015

2014

Knowledge-fused differential dependency network models for detecting significant rewiring in biological networks.

Ye Tian, Bai Zhang, Eric P. Hoffman, Robert Clarke, Zhen Zhang, Ie-Ming Shih, Jianhua Xuan, David M. Herrington, Yue Joseph Wang

BMC Syst. Biol., 2014

2012

An Overview of Population Genetic Data Simulation.

Xiguo Yuan, David J. Miller, Junying Zhang, David M. Herrington, Yue Wang

J. Comput. Biol., 2012

2009

An algorithm for learning maximum entropy probability models of disease risk that efficiently searches and sparingly encodes multilocus genomic interactions.

David J. Miller, Yanxin Zhang, Guoqiang Yu, Yongmei Liu, Li Chen, Carl D. Langefeld, David M. Herrington, Yue Joseph Wang

Bioinform., 2009

2002

Estimation of complex ultrasonic medium responses by deconvolution.

Zhiping Mu, Robert J. Plemmons, David M. Herrington, Peter Santago II

Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging, 2002

2000

Ultrasound Measurement of Brachial Flow-mediated Vasodilator Response.

Liexiang Fan, Peter Santago II, Huai Jiang, David M. Herrington

IEEE Trans. Medical Imaging, 2000

1999

3D ultrasound image segmentation using multiple incomplete feature sets.

Liexiang Fan, David M. Herrington, Peter Santago

Proceedings of the Medical Imaging 1999: Image Processing, 1999