Daniel J. Park

According to our database, Daniel J. Park authored at least 8 papers between 2012 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

Emerging algorithmic bias: fairness drift as the next dimension of model maintenance and sustainability.

Sharon E. Davis, Chad Dorn, Daniel J. Park, Michael E. Matheny

J. Am. Medical Informatics Assoc., 2025

2024

Polyphonia: detecting inter-sample contamination in viral genomic sequencing data.

Lydia A. Krasilnikova, Christopher Tomkins-Tinch, Alton C. Gayton, Stephen F. Schaffner, Sabrina T. Dobbins, Adrianne Gladden-Young, Katherine J. Siddle, Daniel J. Park, Pardis C. Sabeti

Bioinform., 2024

2017

Virus genomes reveal factors that spread and sustained the Ebola epidemic.

Gytis Dudas, Luiz Max Carvalho, Trevor Bedford, Andrew J. Tatem, Guy Baele, Nuno R. Faria, Daniel J. Park, Jason T. Ladner, Armando Arias, Danny Asogun, Filip Bielejec, Sarah L. Caddy, Matthew Cotten, Jonathan D'Ambrozio, Simon Dellicour, Antonino Di Caro, Joseph W. Diclaro, Sophie Duraffour, Michael J. Elmore, Lawrence S. Fakoli, Ousmane Faye, Merle L. Gilbert, Sahr M. Gevao, Stephen Gire, Adrianne Gladden-Young, Andreas Gnirke, Augustine Goba, Donald S. Grant, Bart L. Haagmans, Julian A. Hiscox, Umaru Jah, Jeffrey R. Kugelman, Di Liu, Jia Lu, Christine M. Malboeuf, Suzanne Mate, David A. Matthews, Christian B. Matranga, Luke W. Meredith, James Qu, Joshua Quick, Suzan D. Pas, My V. T. Phan, Georgios Pollakis, Chantal B. Reusken, Mariano Sanchez-Lockhart, Stephen F. Schaffner, John S. Schieffelin, Rachel S. G. Sealfon, Etienne Simon-Loriere, Saskia L. Smits, Kilian Stoecker, Lucy Thorne, Ekaete Alice Tobin, Mohamed A. Vandi, Simon J. Watson, Kendra West, Shannon Whitmer, Michael R. Wiley, Sarah M. Winnicki, Shirlee Wohl, Roman Wölfel, Nathan L. Yozwiak, Kristian G. Andersen, Sylvia O. Blyden, Fatorma Bolay, Miles W. Carroll, Bernice Dahn, Boubacar Diallo, Pierre Formenty, Christophe Fraser, George F. Gao, Robert F. Garry, Ian Goodfellow, Stephan Günther, Christian T. Happi, Edward C. Holmes, Brima Kargbo, Sakoba Keïta, Paul Kellam, Marion Koopmans, Jens H. Kuhn, Nicholas J. Loman, N'Faly Magassouba, Dhamari Naidoo, Stuart T. Nichol, Tolbert Nyenswah, Gustavo F. Palacios, Oliver G. Pybus, Pardis C. Sabeti, Amadou Sall, Ute Ströher, Isatta Wurie, Marc A. Suchard, Philippe Lemey, Andrew Rambaut

Nat., 2017

2016

UNDR ROVER - a fast and accurate variant caller for targeted DNA sequencing.

Daniel J. Park, Roger Li, Edmund Lau, Peter Georgeson, Tu Nguyen-Dumont, Bernard J. Pope

BMC Bioinform., 2016

2014

ROVER variant caller: read-pair overlap considerate variant-calling software applied to PCR-based massively parallel sequencing datasets.

Bernard J. Pope, Tu Nguyen-Dumont, Fleur Hammet, Daniel J. Park

Source Code Biol. Medicine, 2014

Annokey: an annotation tool based on key term search of the NCBI Entrez Gene database.

Daniel J. Park, Tu Nguyen-Dumont, Sori Kang, Karin Verspoor, Bernard J. Pope

Source Code Biol. Medicine, 2014

2013

FAVR (Filtering and Annotation of Variants that are Rare): methods to facilitate the analysis of rare germline genetic variants from massively parallel sequencing datasets.

Bernard J. Pope, Tu Nguyen-Dumont, Fabrice Odefrey, Russell Bell, Sean V. Tavtigian, David E. Goldgar, Andrew Lonie, Melissa C. Southey, Daniel J. Park

BMC Bioinform., 2013

2012

Supercomputing enabling exhaustive statistical analysis of genome wide association study data: Preliminary results.

Matthias Reumann, Enes Makalic, Benjamin W. Goudey, Michael Inouye, Adrian Bickerstaffe, Minh Bui, Daniel J. Park, Miroslaw K. Kapuscinski, Daniel F. Schmidt, Zeyu Zhou, Guoqi Q. Qian, Justin Zobel, John Wagner, John L. Hopper

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2012