Dustin Machi

According to our database1, Dustin Machi authored at least 23 papers between 2014 and 2023.

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Bibliography

2023
Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR.
Nucleic Acids Res., January, 2023

Data-driven scalable pipeline using national agent-based models for real-time pandemic response and decision support.
Int. J. High Perform. Comput. Appl., 2023

A Network Synthesis and Analytics Pipeline with Applications to Sustainable Energy in Smart Grid.
Proceedings of the 19th IEEE International Conference on e-Science, 2023

2022
A Web-Based System for Contagion Simulations on Networked Populations.
Proceedings of the 18th IEEE International Conference on e-Science, 2022

2021
A genomic data resource for predicting antimicrobial resistance from laboratory-derived antimicrobial susceptibility phenotypes.
Briefings Bioinform., 2021

CSonNet: An Agent-Based Modeling Software System for Discrete Time Simulation.
Proceedings of the Winter Simulation Conference, 2021

GraphTrans: A Software System for Network Conversions for Simulation, Structural Analysis, and Graph Operations.
Proceedings of the Winter Simulation Conference, 2021

ExecutionManager: A Software System to Control Execution of Third-Party Software that Performs Network Computations.
Proceedings of the Winter Simulation Conference, 2021

Interactive Demonstrations and Hands-On Use of thenet.science Cyberinfrastructure for Network Science Chairs' Welcome and Tutorial Summary.
Proceedings of the WebSci '21: 13th ACM Web Science Conference 2021, 2021

Scalable Epidemiological Workflows to Support COVID-19 Planning and Response.
Proceedings of the 35th IEEE International Parallel and Distributed Processing Symposium, 2021

A Framework for Simulating Multiple Contagions Over Multiple Networks.
Proceedings of the Complex Networks & Their Applications X - Volume 2, Proceedings of the Tenth International Conference on Complex Networks and Their Applications COMPLEX NETWORKS 2021, Madrid, Spain, November 30, 2021

AI-Driven Agent-Based Models to Study the Role of Vaccine Acceptance in Controlling COVID-19 Spread in the US.
Proceedings of the 2021 IEEE International Conference on Big Data (Big Data), 2021

2020
Networked experiments and modeling for producing collective identity in a group of human subjects using an iterative abduction framework.
Soc. Netw. Anal. Min., 2020

The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.
Nucleic Acids Res., 2020

From 5Vs to 6Cs: Operationalizing Epidemic Data Management with COVID-19 Surveillance.
Proceedings of the 2020 IEEE International Conference on Big Data (IEEE BigData 2020), 2020

2019
PATRIC as a unique resource for studying antimicrobial resistance.
Briefings Bioinform., 2019

On the Modeling and Agent-Based Simulation of a Cooperative Group Anagram Game.
Proceedings of the 2019 Winter Simulation Conference, 2019

Mechanistic and data-driven agent-based models to explain human behavior in online networked group anagram games.
Proceedings of the ASONAM '19: International Conference on Advances in Social Networks Analysis and Mining, 2019

2018
Pipelines and their Compositions for Modeling and Analysis of controlled Online Networked Social Science Experiments.
Proceedings of the 2018 Winter Simulation Conference, 2018

Generative Modeling of Human Behavior and Social Interactions Using Abductive Analysis.
Proceedings of the IEEE/ACM 2018 International Conference on Advances in Social Networks Analysis and Mining, 2018

2017
Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center.
Nucleic Acids Res., 2017

2015
RNA-Rocket: an RNA-Seq analysis resource for infectious disease research.
Bioinform., 2015

2014
PATRIC, the bacterial bioinformatics database and analysis resource.
Nucleic Acids Res., 2014


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