Eric P. Hoffman
Orcid: 0000-0001-6470-5139
According to our database1,
Eric P. Hoffman
authored at least 42 papers
between 1994 and 2015.
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Bibliography
2015
KDDN: an open-source Cytoscape app for constructing differential dependency networks with significant rewiring.
Bioinform., 2015
2014
Knowledge-fused differential dependency network models for detecting significant rewiring in biological networks.
BMC Syst. Biol., 2014
Predicting age at loss of ambulation in Duchenne muscular dystrophy with deep phenotypic measures.
Proceedings of the 2014 IEEE Global Conference on Signal and Information Processing, 2014
2013
J. Mach. Learn. Res., 2013
2012
Computational analysis of muscular dystrophy sub-types using a novel integrative scheme.
Neurocomputing, 2012
2011
Motif-guided sparse decomposition of gene expression data for regulatory module identification.
BMC Bioinform., 2011
Bioinform., 2011
PUGSVM: a caBIG<sup>TM</sup> analytical tool for multiclass gene selection and predictive classification.
Bioinform., 2011
2010
Matched Gene Selection and Committee Classifier for Molecular Classification of Heterogeneous Diseases.
J. Mach. Learn. Res., 2010
BMC Bioinform., 2010
Multilevel support vector regression analysis to identify condition-specific regulatory networks.
Bioinform., 2010
2009
GeneShelf: A Web-based Visual Interface for Large Gene Expression Time-Series Data Repositories.
IEEE Trans. Vis. Comput. Graph., 2009
Int. J. Data Min. Bioinform., 2009
Identification of condition-specific regulatory modules through multi-level motif and mRNA expression analysis.
Int. J. Comput. Biol. Drug Des., 2009
Differential dependency network analysis to identify condition-specific topological changes in biological networks.
Bioinform., 2009
2008
caBIG<sup>TM</sup> VISDA: Modeling, visualization, and discovery for cluster analysis of genomic data.
BMC Bioinform., 2008
BMC Bioinform., 2008
Knowledge-guided multi-scale independent component analysis for biomarker identification.
BMC Bioinform., 2008
Proceedings of the Bioinformatics Research and Applications, 2008
Sparse Decomposition of Gene Expression Data to Infer Transcriptional Modules Guided by Motif Information.
Proceedings of the Bioinformatics Research and Applications, 2008
Exploring Transcriptional Modules Through Integrative Gene Clustering Guided by Transcription Factor Binding Information.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008
Identification of Condition-specific Regulatory Modules by Multi-level Motif and mRNA Expression Analysis.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2008
Inferring Condition-Specific miRNA-Gene Modules from miRNA and mRNA Profiling Data.
Proceedings of the International Conference on Bioinformatics, 2008
Reliability Analysis of Transcriptional Regulatory Networks.
Proceedings of the International Conference on Bioinformatics, 2008
2007
EURASIP J. Bioinform. Syst. Biol., 2007
Proceedings of the Sixth International Conference on Machine Learning and Applications, 2007
Stability-Based Dimension Estimation of ICA with Application to Microarray Data Analysis.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2007
2006
Optimized multilayer perceptrons for molecular classification and diagnosis using genomic data.
Bioinform., 2006
Bioinform., 2006
Proceedings of the 28th International Conference of the IEEE Engineering in Medicine and Biology Society, 2006
Proceedings of the 28th International Conference of the IEEE Engineering in Medicine and Biology Society, 2006
ModVis: An information visualization tool for gene module discovery.
Proceedings of the ISCA 19th International Conference on Computer Applications in Industry and Engineering, 2006
2005
Proceedings of the Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 2005
Proceedings of the Advances in Bioinformatics and Its Applications, 2005
2004
The PEPR GeneChip data warehouse, and implementation of a dynamic time series query tool (SGQT) with graphical interface.
Nucleic Acids Res., 2004
Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays.
Bioinform., 2004
Robust Feature Selection by Weighted Fisher Criterion for Multiclass Prediction in Gene Expression Profiling.
Proceedings of the 17th International Conference on Pattern Recognition, 2004
2003
Interactive color mosaic and dendrogram displays for signal/noise optimization in microarray data analysis.
Proceedings of the 2003 IEEE International Conference on Multimedia and Expo, 2003
2002
Development and production of an oligonucleotide MuscleChip: use for validation of ambiguous ESTs.
BMC Bioinform., 2002
Sources of variability and effect of experimental approach on expression profiling data interpretation.
BMC Bioinform., 2002
1994
Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, 1994