Flavio Mignone

According to our database, Flavio Mignone authored at least 15 papers between 2002 and 2018.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2018

STAble: a novel approach to de novo assembly of RNA-seq data and its application in a metabolic model network based metatranscriptomic workflow.

Igor Saggese, Elisa Bona, Maxwell Conway, Francesco Favero, Marco Ladetto, Pietro Liò, Giovanni Manzini, Flavio Mignone

BMC Bioinform., 2018

2013

NGS-Trex: Next Generation Sequencing Transcriptome profile explorer.

Ilenia Boria, Lara Boatti, Graziano Pesole, Flavio Mignone

BMC Bioinform., 2013

2011

ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing.

Pier Luigi Martelli, Mattia D'Antonio, Paola Bonizzoni, Tiziana Castrignanò, Anna Maria D'Erchia, Paolo D'Onorio De Meo, Piero Fariselli, Michele Finelli, Flavio Licciulli, Marina Mangiulli, Flavio Mignone, Giulio Pavesi, Ernesto Picardi, Raffaella Rizzi, Ivan Rossi, Alessio Valletti, Andrea Zauli, Federico Zambelli, Rita Casadio, Graziano Pesole

Nucleic Acids Res., 2011

2010

UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs.

Giorgio Grillo, Antonio Turi, Flavio Licciulli, Flavio Mignone, Sabino Liuni, Sandro Banfi, Vincenzo Alessandro Gennarino, David Stephen Horner, Giulio Pavesi, Ernesto Picardi, Graziano Pesole

Nucleic Acids Res., 2010

2009

EasyCluster: a fast and efficient gene-oriented clustering tool for large-scale transcriptome data.

Ernesto Picardi, Flavio Mignone, Graziano Pesole

BMC Bioinform., 2009

Statistical assessment of discriminative features for protein-coding and non coding cross-species conserved sequence elements.

Teresa Maria Creanza, David Stephen Horner, Annarita D'Addabbo, Rosalia Maglietta, Flavio Mignone, Nicola Ancona, Graziano Pesole

BMC Bioinform., 2009

2008

ASPicDB: A database resource for alternative splicing analysis.

Tiziana Castrignanò, Mattia D'Antonio, Anna Anselmo, Danilo Carrabino, A. D'Onorio De Meo, Anna Maria D'Erchia, Flavio Licciulli, Marina Mangiulli, Flavio Mignone, Giulio Pavesi, Ernesto Picardi, Alberto Riva, Raffaella Rizzi, Paola Bonizzoni, Graziano Pesole

Bioinform., 2008

HT-RLS: High-Throughput Web Tool for Analysis of DNA Microarray Data Using RLS classifiers.

Paolo D'Onorio De Meo, Danilo Carrabino, Mattia D'Antonio, Annarita D'Addabbo, Sabino Liuni, Flavio Mignone, Graziano Pesole, Nicola Ancona

Proceedings of the 8th IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2008), 2008

2007

A high performance grid-web service framework for the identification of 'conserved sequence tags'.

Paolo D'Onorio De Meo, Danilo Carrabino, Nico Sanna, Tiziana Castrignanò, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Matteo Re, Flavio Mignone, Graziano Pesole

Future Gener. Comput. Syst., 2007

2006

GenoMiner: a tool for genome-wide search of coding and non-coding conserved sequence tags.

Tiziana Castrignanò, Paolo D'Onorio De Meo, Giorgio Grillo, Sabino Liuni, Flavio Mignone, Ivano Giuseppe Talamo, Graziano Pesole

Bioinform., 2006

2005

UTRdb and UTRsite: a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs.

Flavio Mignone, Giorgio Grillo, Flavio Licciulli, Michele Iacono, Sabino Liuni, Paul J. Kersey, Jorge Duarte, Cecilia Saccone, Graziano Pesole

Nucleic Acids Res., 2005

DG-CST (Disease Gene Conserved Sequence Tags), a database of human-mouse conserved elements associated to disease genes.

Angelo Boccia, Mauro Petrillo, Diego di Bernardo, Alessandro Guffanti, Flavio Mignone, Stefano Confalonieri, Lucilla Luzi, Graziano Pesole, Giovanni Paolella, Andrea Ballabio, Sandro Banfi

Nucleic Acids Res., 2005

2004

CSTminer: a web tool for the identification of coding and noncoding conserved sequence tags through cross-species genome comparison.

Tiziana Castrignanò, Alessandro Canali, Giorgio Grillo, Sabino Liuni, Flavio Mignone, Graziano Pesole

Nucleic Acids Res., 2004

WebVar: a resource for the rapid estimation of relative site variability from multiple sequence alignments.

Flavio Mignone, David Stephen Horner, Graziano Pesole

Bioinform., 2004

2002

UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Update 2002.

Graziano Pesole, Sabino Liuni, Giorgio Grillo, Flavio Licciulli, Flavio Mignone, Carmela Gissi, Cecilia Saccone

Nucleic Acids Res., 2002