Hidetoshi Kono

Orcid: 0000-0001-5729-8707

According to our database1, Hidetoshi Kono authored at least 15 papers between 1999 and 2022.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Bibliography

2022
Extended ensemble simulations of a SARS-CoV-2 nsp1-5'-UTR complex.
PLoS Comput. Biol., 2022

2019
Correction: Free energy profiles for unwrapping the outer superhelical turn of nucleosomal DNA.
PLoS Comput. Biol., 2019

2018
Free energy profiles for unwrapping the outer superhelical turn of nucleosomal DNA.
PLoS Comput. Biol., 2018

2016
H3 Histone Tail Conformation within the Nucleosome and the Impact of K14 Acetylation Studied Using Enhanced Sampling Simulation.
PLoS Comput. Biol., 2016

2014
Adaptive lambda square dynamics simulation: An efficient conformational sampling method for biomolecules.
J. Comput. Chem., 2014

2008
coliSNP database server mapping nsSNPs on protein structures.
Nucleic Acids Res., 2008

2006
ReadOut: structure-based calculation of direct and indirect readout energies and specificities for protein-DNA recognition.
Nucleic Acids Res., 2006

Disentangling the Role of Tetranucleotide in the Sequence-Dependence of DNA Conformation: A Molecular Dynamics Approach.
Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, 2006

2005
Integration of Bioinformatics and Computational Biology to Understand Protein-dna Recognition Mechanism.
J. Bioinform. Comput. Biol., 2005

Progress in the development and application of computational methods for probabilistic protein design.
Comput. Chem. Eng., 2005

2004
Structure-Function Relationship in DNA Sequence Recognition by Transcription Factors.
Proceedings of the Second Asia-Pacific Bioinformatics Conference (APBC 2004), 2004

2001
Thermodynamic database for protein-nucleic acid interactions (ProNIT).
Bioinform., 2001

2000
ProTherm, version 2.0: thermodynamic database for proteins and mutants.
Nucleic Acids Res., 2000

Multicanonical Monte Carlo calculation of the free-energy map of the base-amino acid interaction.
J. Comput. Chem., 2000

1999
ProTherm: Thermodynamic Database for Proteins and Mutants.
Nucleic Acids Res., 1999


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