Ilya N. Shindyalov

According to our database1, Ilya N. Shindyalov authored at least 20 papers between 1992 and 2006.

Collaborative distances:



In proceedings 
PhD thesis 




DMAPS: a database of multiple alignments for protein structures.
Nucleic Acids Research, 2006

The Encyclopedia of Life Project: Grid Software and Deployment.
New Generation Comput., 2004

CE-MC: a multiple protein structure alignment server.
Nucleic Acids Research, 2004

A New Scoring Function and Associated Statistical Significance for Structure Alignment by CE.
Journal of Computational Biology, 2004

A case study of high-throughput biological data processing on parallel platforms.
Bioinformatics, 2004

The Status of Structural Genomics Defined Through the Analysis of Current Targets and Structures.
Proceedings of the Biocomputing 2004, 2004

PDP: protein domain parser.
Bioinformatics, 2003

Parallel Processing on Large Redudant Biological Data Sets: Protein Structures Classification with CEPAR.
Proceedings of the Parallel Computing: Software Technology, 2003

CKAAPs DB: a Conserved Key Amino Acid Positions DataBase.
Nucleic Acids Research, 2002

Building an automated classification of DNA-binding protein domains.
Proceedings of the European Conference on Computational Biology (ECCB 2002), 2002

A database and tools for 3-D protein structure comparison and alignment using the Combinatorial Extension (CE) algorithm.
Nucleic Acids Research, 2001

CKAAPs DB: a conserved key amino acid positions database.
Nucleic Acids Research, 2001

A New Algorithm for the Alignment of Multiple Protein Structures Using Monte Carlo Optimization.
Proceedings of the 6th Pacific Symposium on Biocomputing, 2001

The Protein Data Bank.
Nucleic Acids Research, 2000

Protein data representation and query using optimized data decomposition.
Computer Applications in the Biosciences, 1997

Identification of CDNA Sequences by Specific Oligonucleotide Sets - A Computer Tool and Application.
Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology, 1995

Design and use of a software framework to obtain information derived from macromolecular structure data.
Proceedings of the 28th Annual Hawaii International Conference on System Sciences (HICSS-28), 1995

Design and application of PDBlib, a C++ macromolecular class library.
Computer Applications in the Biosciences, 1994

Design and Application of a C++ Macromolecular Class Library.
Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, 1994

Fast, statistically based alignment of amino acid sequences on the base of diagonal fragments of DOT-matrices.
Computer Applications in the Biosciences, 1992