John D. Westbrook

Orcid: 0000-0002-6686-5475

According to our database1, John D. Westbrook authored at least 40 papers between 1992 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

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Links

Online presence:

On csauthors.net:

Bibliography

2024
PDB NextGen Archive: centralizing access to integrated annotations and enriched structural information by the Worldwide Protein Data Bank.
Database J. Biol. Databases Curation, January, 2024

2023
RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning.
Nucleic Acids Res., January, 2023

Digitizing Suzette: Creating a Framework for the Collaborative Analysis of an Historical French Textbook.
Proceedings of the Annual International Conference of the Alliance of Digital Humanities Organizations, 2023

2022
RCSB Protein Data Bank: improved annotation, search and visualization of membrane protein structures archived in the PDB.
Bioinform., 2022

2021
RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences.
Nucleic Acids Res., 2021

RCSB Protein Data Bank 1D tools and services.
Bioinform., 2021

2020
Impact of the Protein Data Bank Across Scientific Disciplines.
Data Sci. J., 2020

2019
RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy.
Nucleic Acids Res., 2019

2018
Worldwide Protein Data Bank biocuration supporting open access to high-quality 3D structural biology data.
Database J. Biol. Databases Curation, 2018

2017
The RCSB protein data bank: integrative view of protein, gene and 3D structural information.
Nucleic Acids Res., 2017

Crystallography and Databases.
Data Sci. J., 2017

2016
EMDataBank unified data resource for 3DEM.
Nucleic Acids Res., 2016

2015
The RCSB Protein Data Bank: views of structural biology for basic and applied research and education.
Nucleic Acids Res., 2015

The chemical component dictionary: complete descriptions of constituent molecules in experimentally determined 3D macromolecules in the Protein Data Bank.
Bioinform., 2015

2014
The Nucleic Acid Database: new features and capabilities.
Nucleic Acids Res., 2014

2013
The RCSB Protein Data Bank: new resources for research and education.
Nucleic Acids Res., 2013

Chemical annotation of small and peptide-like molecules at the Protein Data Bank.
Database J. Biol. Databases Curation, 2013

2011
The RCSB Protein Data Bank: redesigned web site and web services.
Nucleic Acids Res., 2011

EMDataBank.org: unified data resource for CryoEM.
Nucleic Acids Res., 2011

2009
The protein structure initiative structural genomics knowledgebase.
Nucleic Acids Res., 2009

2008
Bioinformatic Databases.
Proceedings of the Wiley Encyclopedia of Computer Science and Engineering, 2008

Remediation of the protein data bank archive.
Nucleic Acids Res., 2008

2006
The RCSB PDB information portal for structural genomics.
Nucleic Acids Res., 2006

2005
The RCSB Protein Data Bank: a redesigned query system and relational database based on the mmCIF schema.
Nucleic Acids Res., 2005

PDBML: the representation of archival macromolecular structure data in XML.
Bioinform., 2005

A framework for scientific data modeling and automated software development.
Bioinform., 2005

2004
The distribution and query systems of the RCSB Protein Data Bank.
Nucleic Acids Res., 2004

Ligand Depot: a data warehouse for ligands bound to macromolecules.
Bioinform., 2004

TargetDB: a target registration database for structural genomics projects.
Bioinform., 2004

The Protein Data Bank and lessons in data management.
Briefings Bioinform., 2004

The Status of Structural Genomics Defined Through the Analysis of Current Targets and Structures.
Proceedings of the Biocomputing 2004, 2004

2003
The Need for Dictionaries, Ontologies, and Controlled Vocabularies.
OMICS, 2003

Tools for the automatic identification and classification of RNA base pairs.
Nucleic Acids Res., 2003

The Protein Data Bank and structural genomics.
Nucleic Acids Res., 2003

2002
The Protein Data Bank: unifying the archive.
Nucleic Acids Res., 2002

An ontology driven architecture for derived representations of macromolecular structure.
Bioinform., 2002

2001
The PDB data uniformity project.
Nucleic Acids Res., 2001

2000
The Protein Data Bank.
Nucleic Acids Res., 2000

STAR/mmCIF: An ontology for macromolecular structure.
Bioinform., 2000

1992
An Interactive FORTRAN Program for Three-dimensional Molecular Visualization.
Comput. Chem., 1992


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