Jared T. Simpson

According to our database, Jared T. Simpson authored at least 7 papers between 2010 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2020

GPU accelerated adaptive banded event alignment for rapid comparative nanopore signal analysis.

Hasindu Gamaarachchi, Wai Chun Lam, Gihan Jayatilaka, Hiruna Samarakoon, Jared T. Simpson, Martin A. Smith, Sri Parameswaran

BMC Bioinform., 2020

2017

Nanocall: an open source basecaller for Oxford Nanopore sequencing data.

Matei David, L. J. Dursi, Delia Yao, Paul C. Boutros, Jared T. Simpson

Bioinform., 2017

2015

MinION Analysis and Reference Consortium: Phase 1 data release and analysis.

Camilla L. C. Ip, Matthew Loose, John R. Tyson, Mariateresa de Cesare, Bonnie L. Brown, Miten Jain, Richard M. Leggett, David A. Eccles, Vadim Zalunin, John M. Urban, Paolo Piazza, Rory J. Bowden, Benedict Paten, Solomon Mwaigwisya, Elizabeth M. Batty, Jared T. Simpson, Terrance P. Snutch, Ewan Birney, David Buck, Sara Goodwin, Hans J. Jansen, Justin O'Grady, Hugh E. Olsen, MinION Analysis, Reference Consortium

F1000Research, 2015

2014

Exploring genome characteristics and sequence quality without a reference.

Jared T. Simpson

Bioinform., 2014

On the Representation of de Bruijn Graphs.

Rayan Chikhi, Antoine Limasset, Shaun Jackman, Jared T. Simpson, Paul Medvedev

Proceedings of the Research in Computational Molecular Biology, 2014

2010

Copy number variant detection in inbred strains from short read sequence data.

Jared T. Simpson, Rebecca E. McIntyre, David J. Adams, Richard Durbin

Bioinform., 2010

Efficient construction of an assembly string graph using the FM-index.

Jared T. Simpson, Richard Durbin

Bioinform., 2010