Jason Tsong-Li Wang

According to our database1, Jason Tsong-Li Wang
  • authored at least 134 papers between 1990 and 2017.
  • has a "Dijkstra number"2 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Other 

Links

Homepage:

On csauthors.net:

Bibliography

2017
Guest Editorial: Special Section on Biological Data Mining and Its Applications in Healthcare.
IEEE/ACM Trans. Comput. Biology Bioinform., 2017

A Computational Approach to Finding RNA Tertiary Motifs in Genomic Sequences.
CoRR, 2017

MapReduce Algorithms for Inferring Gene Regulatory Networks from Time-Series Microarray Data Using an Information-Theoretic Approach.
CoRR, 2017

Transfer Learning Approaches to Improve Drug Sensitivity Prediction in Multiple Myeloma Patients.
IEEE Access, 2017

Reverse Engineering Gene Regulatory Networks Using Sampling and Boosting Techniques.
Proceedings of the Machine Learning and Data Mining in Pattern Recognition, 2017

2016
Effective Classification of MicroRNA Precursors Using Combinatorial Feature Mining and AdaBoost Algorithms.
CoRR, 2016

Semi-Supervised Prediction of Gene Regulatory Networks Using Machine Learning Algorithms.
CoRR, 2016

CHSalign: A Web Server That Builds upon Junction-Explorer and RNAJAG for Pairwise Alignment of RNA Secondary Structures with Coaxial Helical Stacking.
CoRR, 2016

A Learning Framework to Improve Unsupervised Gene Network Inference.
Proceedings of the Machine Learning and Data Mining in Pattern Recognition, 2016

Inferring Gene Regulatory Networks by Combining Supervised and Unsupervised Methods.
Proceedings of the 15th IEEE International Conference on Machine Learning and Applications, 2016

Bioinformatics Database Systems.
CRC Press, ISBN: 978-1-4398-1247-1, 2016

2015
New Techniques for Mining Frequent Patterns in Unordered Trees.
IEEE Trans. Cybernetics, 2015

Effective alignment of RNA pseudoknot structures using partition function posterior log-odds scores.
BMC Bioinformatics, 2015

A New Approach to Link Prediction in Gene Regulatory Networks.
Proceedings of the Intelligent Data Engineering and Automated Learning - IDEAL 2015, 2015

2014
Genome-Wide Prediction of Coaxial Helical Stacking Using Random Forests and Covariance Models.
International Journal on Artificial Intelligence Tools, 2014

2013
Novel features for identifying A-minors in three-dimensional RNA molecules.
Computational Biology and Chemistry, 2013

2012
Fast Elastic Peak Detection for Mass Spectrometry Data Mining.
IEEE Trans. Knowl. Data Eng., 2012

A Method for Discovering Common Patterns from Two RNA Secondary Structures and its Application to Structural Repeat Detection.
J. Bioinformatics and Computational Biology, 2012

Searching for Non-coding RNAs in Genomic Sequences Using ncRNAscout.
Genomics, Proteomics & Bioinformatics, 2012

Pre-miRNA classification via combinatorial feature mining and boosting.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

Genome-wide search for coaxial helical stacking motifs.
Proceedings of the 12th IEEE International Conference on Bioinformatics & Bioengineering, 2012

2011
In silico prediction of noncoding RNAs using supervised learning and feature ranking methods.
IJBRA, 2011

2010
On Comparing Two Structured RNA Multiple alignments.
J. Bioinformatics and Computational Biology, 2010

Bioinformatics Methods for Studying MicroRNA and ARE-Mediated Regulation of Post-Transcriptional Gene Expression.
IJKDB, 2010

2008
Bioinformatic Databases.
Proceedings of the Wiley Encyclopedia of Computer Science and Engineering, 2008

Discovering Frequent Agreement Subtrees from Phylogenetic Data.
IEEE Trans. Knowl. Data Eng., 2008

Detecting conserved secondary structures in RNA molecules using constrained structural alignment.
Computational Biology and Chemistry, 2008

2007
RADAR: a web server for RNA data analysis and research.
Nucleic Acids Research, 2007

Biological data cleaning: a case study.
IJIQ, 2007

A study of phylogenetic tools for genomic nomenclature data cleaning.
Proceedings of the 12th Annual SIGCSE Conference on Innovation and Technology in Computer Science Education, 2007

Toward an Integrated RNA Motif Database.
Proceedings of the Data Integration in the Life Sciences, 4th International Workshop, 2007

Detecting Conserved RNA Secondary Structures in Viral Genomes: The RADAR Approach.
Proceedings of the Intelligence and Security Informatics: Biosurveillance, 2007

A New Algorithm for RNA Secondary Structure Prediction.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2007

Constrained RNA Structural Alignment: Algorithms and Application to Motif Detection in the Untranslated Regions of Trypanosoma brucei mRNAs.
Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

Classification of RNA Sequences with Support Vector Machines.
Proceedings of the Analysis of Biological Data: A Soft Computing Approach, 2007

2006
Kernel design for RNA classification using Support Vector Machines.
IJDMB, 2006

PhyloMiner: A Tool for Evolutionary Data Analysis.
Proceedings of the 18th International Conference on Scientific and Statistical Database Management, 2006

Mining Frequent Agreement Subtrees in Phylogenetic Databases.
Proceedings of the Sixth SIAM International Conference on Data Mining, 2006

A New Kernel Method for RNA Classification.
Proceedings of the Sixth IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2006), 2006

RADAR: An InteractiveWeb-Based Toolkit for RNA Data Analysis and Research.
Proceedings of the Sixth IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2006), 2006

2005
MetricMap: an embedding technique for processing distance-based queries in metric spaces.
IEEE Trans. Systems, Man, and Cybernetics, Part B, 2005

Xml Clustering And Retrieval Through Principal Component Analysis.
International Journal on Artificial Intelligence Tools, 2005

A method for aligning RNA secondary structures and its application to RNA motif detection.
BMC Bioinformatics, 2005

Lineage Path Integration for Phylogenetic Resources.
Proceedings of the 17th International Conference on Scientific and Statistical Database Management, 2005

Biomonitoring, Phylogenetics and Anomaly Aggregation Systems.
Proceedings of the Intelligence and Security Informatics, 2005

Introduction to Data Mining in Bioinformatics.
Proceedings of the Data Mining in Bioinformatics, 2005

2004
BIO-AJAX: An Extensible Framework for Biological Data Cleaning.
SIGMOD Record, 2004

GeneScout: a data mining system for predicting vertebrate genes in genomic DNA sequences.
Inf. Sci., 2004

FlowMiner: Finding Flow Patterns in Spatio-Temporal Databases.
Proceedings of the 16th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2004), 2004

XML Clustering by Principal Component Analysis.
Proceedings of the 16th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2004), 2004

Unordered Tree Mining with Applications to Phylogeny.
Proceedings of the 20th International Conference on Data Engineering, 2004

2003
Data mining in bioinformatics: report on BIOKDD'03.
SIGKDD Explorations, 2003

Special issue on data management in bioinformatics.
Inf. Syst., 2003

TreeRank: A Similarity Measure for Nearest Neighbor Searching in Phylogenetic Databases.
Proceedings of the 15th International Conference on Scientific and Statistical Database Management (SSDBM 2003), 2003

Opening Remarks.
Proceedings of the 3nd ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2003), 2003

Protein Classification: A Geometric Hashing Approach.
Computational Biology and Genome Informatics, 2003

2002
Finding Patterns in Three-Dimensional Graphs: Algorithms and Applications to Scientific Data Mining.
IEEE Trans. Knowl. Data Eng., 2002

BIOKDD 2002: Recent Advanced in Data Minig for Bioinformatics.
SIGKDD Explorations, 2002

BIOKDD01: Workshop on Data Mining in Bioinformatics.
SIGKDD Explorations, 2002

Finding approximate patterns in undirected acyclic graphs.
Pattern Recognition, 2002

XML Query by Example.
International Journal of Computational Intelligence and Applications, 2002

ATreeGrep: Approximate Searching in Unordered Trees.
Proceedings of the 14th International Conference on Scientific and Statistical Database Management, 2002

A Structure-Based Search Engine for Phylogenetic Databases.
Proceedings of the 14th International Conference on Scientific and Statistical Database Management, 2002

Algorithmics and Applications of Tree and Graph Searching.
Proceedings of the Twenty-first ACM SIGACT-SIGMOD-SIGART Symposium on Principles of Database Systems, 2002

Clustering and Classifying Enzymes in Metabolic Pathways: Some Preliminary Results.
Proceedings of the 2nd ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2002), 2002

Foreword.
Proceedings of the 2nd ACM SIGKDD Workshop on Data Mining in Bioinformatics (BIOKDD 2002), 2002

Mining Genes in DNA Using GeneScout.
Proceedings of the 2002 IEEE International Conference on Data Mining (ICDM 2002), 2002

2001
DNA sequence classification via an expectation maximization algorithm and neural networks: a case study.
IEEE Trans. Systems, Man, and Cybernetics, Part C, 2001

Finding similar consensus between trees: an algorithm and a distance hierarchy.
Pattern Recognition, 2001

Precise Environmental Searches: Integrating Hierarchical Information Search with EnviroDaemon.
Journal of Systems Integration, 2001

Effective hidden Markov models for detecting splicing junction sites in DNA sequences.
Inf. Sci., 2001

Bioinformatics - Introduction to the Special Issue.
Inf. Sci., 2001

New techniques for extracting features from protein sequences.
IBM Systems Journal, 2001

Mining the World Wide Web: An Information Search Approach
The Kluwer International Series on Information Retrieval 10, Kluwer, ISBN: 0-7923-7349-9, 2001

2000
An Index Structure for Data Mining and Clustering.
Knowl. Inf. Syst., 2000

Fast Similarity Search in Three-Dimensional Structure Databases.
Journal of Chemical Information and Computer Sciences, 2000

Identifying consensus of trees through alignment.
Inf. Sci., 2000

An Approximate Search Engine for Structural Databases.
Proceedings of the 2000 ACM SIGMOD International Conference on Management of Data, 2000

Application of neural networks to biological data mining: a case study in protein sequence classification.
Proceedings of the sixth ACM SIGKDD international conference on Knowledge discovery and data mining, 2000

Application of hidden Markov models to biological data mining: a case study.
Proceedings of the Data Mining and Knowledge Discovery: Theory, 2000

1999
New Techniques for DNA Sequence Classification.
Journal of Computational Biology, 1999

Identifying Approximately Common Substructures in Trees Based on a Restricted Edit Distance.
Inf. Sci., 1999

Biological Data Mining Using Bayesian Neural Networks: A Case Study.
International Journal on Artificial Intelligence Tools, 1999

Biocomputing - Introduction to the Special Issue.
International Journal on Artificial Intelligence Tools, 1999

Evaluating a Class of Distance-Mapping Algorithms for Data Mining and Clustering.
Proceedings of the Fifth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 1999

Application of Bayesian Neural Networks to Protein Sequence Classification.
Proceedings of the International Conference on Artificial Intelligence, 1999

Pattern Discovery and Classification in Biosequences.
Pattern Discovery in Biomolecular Data, 1999

A Framework for Biological Pattern Discovery on Networks of Workstations.
Pattern Discovery in Biomolecular Data, 1999

1998
An Algorithm for Finding the Largest Approximately Common Substructures of Two Trees.
IEEE Trans. Pattern Anal. Mach. Intell., 1998

Scientific Data Mining: A Case Study.
International Journal of Software Engineering and Knowledge Engineering, 1998

Fast similarity search in databases of 3D objects.
Proceedings of the Tenth IEEE International Conference on Tools with Artificial Intelligence, 1998

An Approximate Oracle for Distance in Metric Spaces.
Proceedings of the Combinatorial Pattern Matching, 9th Annual Symposium, 1998

1997
Fast retrieval of electronic messages that contain mistyped words or spelling errors.
IEEE Trans. Systems, Man, and Cybernetics, Part B, 1997

Knowledge Discovering for Document Classification Using Tree Matching in TEXPROS.
Inf. Sci., 1997

Structural Matching and Discovery in Document Databases.
Proceedings of the SIGMOD 1997, 1997

Automated Discovery of Active Motifs in Three Dimensional Molecules.
Proceedings of the Third International Conference on Knowledge Discovery and Data Mining (KDD-97), 1997

Scientific Data Classification: A Case Study.
Proceedings of the 9th International Conference on Tools with Artificial Intelligence, 1997

Electronic enterprise engineering: an outline of an architecture.
Proceedings of the 1997 Workshop on Engineering of Computer-Based Systems (ECBS '97), 1997

A graphical environment for change detection in structured documents.
Proceedings of the 21st International Computer Software and Applications Conference (COMPSAC '97), 1997

1996
Curriculum Knowledge Representation and Manipulation in Knowledge-Based Tutoring Systems.
IEEE Trans. Knowl. Data Eng., 1996

Information Extraction from the Structured Part of Office Documents.
Inf. Sci., 1996

On the Editing Distance Between Undirected Acyclic Graphs.
Int. J. Found. Comput. Sci., 1996

A Visualization Tool for Pattern Matching and Discovery in Scientific Databases.
Proceedings of the 8th International Conference on Software Engineering and Knowledge Engineering, 1996

Scientific Data Mining: A Case Study.
Proceedings of the 8th International Conference on Software Engineering and Knowledge Engineering, 1996

Automated Discovery of Active Motifs in Multiple RNA Secondary Structures.
Proceedings of the Second International Conference on Knowledge Discovery and Data Mining (KDD-96), 1996

1995
Algorithms for Approximate Graph Matching.
Inf. Sci., 1995

A New Approach to Modeling Personal Office Documents.
Data Knowl. Eng., 1995

Pattern Matching and Pattern Discovery in Scientific, Program, and Document Databases.
Proceedings of the 1995 ACM SIGMOD International Conference on Management of Data, 1995

An Integrated Toolkit for Pattern Matching and Pattern Discovery in Scientific, Program, and Document databases.
Proceedings of the SEKE'95, 1995

Fast retrieval of electronic documents in digital libraries.
Proceedings of the Seventh International Conference on Tools with Artificial Intelligence, 1995

LHM: a logic-based hypertext data model for integrating hypertext and information systems.
Proceedings of the 28th Annual Hawaii International Conference on System Sciences (HICSS-28), 1995

On the Editing Distance between Undirected Acyclic Graphs and Related Problems.
CPM, 1995

1994
Exact and approximate algorithms for unordered tree matching.
IEEE Trans. Systems, Man, and Cybernetics, 1994

A System for Approximate Tree Matching.
IEEE Trans. Knowl. Data Eng., 1994

A formal approach to modeling office information systems.
Journal of Systems Integration, 1994

Approximate Tree Matching in the Presence of Variable Length Don't Cares.
J. Algorithms, 1994

Heuristic Classification of Office Documents.
International Journal on Artificial Intelligence Tools, 1994

Combinatorial Pattern Discovery for Scientific Data: Some Preliminary Results.
Proceedings of the 1994 ACM SIGMOD International Conference on Management of Data, 1994

DocFlow: an event-driven visual programming environment for office automation through document processing.
Proceedings of the SEKE'94, 1994

A Knowledge-Based Tutoring System for SQL Programming.
Proceedings of the Sixth International Conference on Tools with Artificial Intelligence, 1994

Approximate Graph Matching Using Probabilistic Hill Climbing Algorithms.
Proceedings of the Sixth International Conference on Tools with Artificial Intelligence, 1994

Document Management Through Hypertext: A Logic Modeling Approach.
Proceedings of the 27th Annual Hawaii International Conference on System Sciences (HICSS-27), 1994

1993
On research issues regarding uncertain query processing in an office document retrieval system.
Journal of Systems Integration, 1993

An Intelligent Documentation Support Environment.
Proceedings of the SEKE'93, 1993

An OI5ce Document Retrieval System with the Capability of Processing Incomplete and Vague Queries.
Proceedings of the SEKE'93, 1993

A Tool for Classifying Office Documents.
Proceedings of the Fifth International Conference on Tools with Artificial Intelligence, 1993

Nested segmentation: an approach for layout analysis in document classification.
Proceedings of the 2nd International Conference Document Analysis and Recognition, 1993

1992
Texpros: an Intelligent Document Processing System.
International Journal of Software Engineering and Knowledge Engineering, 1992

Pattern Matching in Unordered Trees.
Proceedings of the Fourth International Conference on Tools with Artificial Intelligence, 1992

Fast Serial and Parallel Algorithms for Approximate Tree Matching with VLDC's.
Proceedings of the Combinatorial Pattern Matching, Third Annual Symposium, 1992

1991
Optimizing Equijoin Queries In Distributed Databases Where Relations Are Hash Partitioned.
ACM Trans. Database Syst., 1991

A tool for tree pattern matching.
Proceedings of the Third International Conference on Tools for Artificial Intelligence, 1991

1990
New Techniques for Best-Match Retrieval.
ACM Trans. Inf. Syst., 1990

Query Processing for Distance Metrics.
Proceedings of the 16th International Conference on Very Large Data Bases, 1990


  Loading...