Lisa Bastarache

According to our database1, Lisa Bastarache authored at least 27 papers between 2009 and 2022.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.



In proceedings 
PhD thesis 




Cox regression is robust to inaccurate EHR-extracted event time: an application to EHR-based GWAS.
Bioinform., 2022

Phenotyping coronavirus disease 2019 during a global health pandemic: Lessons learned from the characterization of an early cohort.
J. Biomed. Informatics, 2021

Use of electronic health records to support a public health response to the COVID-19 pandemic in the United States: a perspective from 15 academic medical centers.
J. Am. Medical Informatics Assoc., 2021

Developing a Phenotype Risk Score for Opioid Adverse Events.
Proceedings of the AMIA 2020, 2020

Improving the phenotype risk score as a scalable approach to identifying patients with Mendelian disease.
J. Am. Medical Informatics Assoc., 2019

Computable Longitudinal Patient Trajectories.
Proceedings of the AMIA 2018, 2018

Evaluating electronic health record data sources and algorithmic approaches to identify hypertensive individuals.
J. Am. Medical Informatics Assoc., 2017

Association of BMI and Obesity Genetic Risk Score with Surgical Procedures Through a Procedure-wide Association Study.
Proceedings of the AMIA 2017, 2017

Sub-Phenotyping of Crohn's Disease Using a Large Electronic Record Cohort.
Proceedings of the AMIA 2017, 2017


R PheWAS: data analysis and plotting tools for phenome-wide association studies in the R environment.
Bioinform., 2014

Phenome-Wide Association Studies Using NLP-Derived Concepts.
Proceedings of the AMIA 2014, 2014

Development and evaluation of an ensemble resource linking medications to their indications.
J. Am. Medical Informatics Assoc., 2013

Validation and Enhancement of a Computable Medication Indication Resource (MEDI) Using a Large Practice-based Dataset.
Proceedings of the AMIA 2013, 2013

Using PheWAS and Natural Language Processing to Discover Clinical Associations for Congenital Chest Deformities.
Proceedings of the AMIA 2013, 2013

A Natural Language Processing Algorithm to define a Venous Thromboembolism Phenotype.
Proceedings of the AMIA 2013, 2013

Open Source R Implementation of the PheWAS Methodology.
Proceedings of the AMIA 2013, 2013

Classifying ICD-9 codes into meaningful disease categories: A comparison between two coding systems.
Proceedings of the AMIA 2013, 2013

A General Purpose Phenotype Algorithm for Venous Thromboembolism Using Billing Codes and Natural Language Processing.
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012

Comparing Diagnoses Recorded in Problem Lists vs. Administrative Codes.
Proceedings of the AMIA 2012, 2012

Using PheWAS to Assess Pleiotropy of Genetic Risk Scores for Rheumatoid Arthritis and Coronary Artery Disease in the eMERGE Network.
Proceedings of the AMIA 2012, 2012

Diabetes and Susceptibility to Infection: A Study of Lab Culture Results in the EMR.
Proceedings of the AMIA 2012, 2012

Integrating existing natural language processing tools for medication extraction from discharge summaries.
J. Am. Medical Informatics Assoc., 2010

Extracting timing and status descriptors for colonoscopy testing from electronic medical records.
J. Am. Medical Informatics Assoc., 2010

PheWAS: demonstrating the feasibility of a phenome-wide scan to discover gene-disease associations.
Bioinform., 2010

Tracking medical students' clinical experiences using natural language processing.
J. Biomed. Informatics, 2009

Development of a Natural Language Processing System to Identify Timing and Status of Colonoscopy Testing in Electronic Medical Records.
Proceedings of the AMIA 2009, 2009