Shyr Yu

According to our database1, Shyr Yu authored at least 37 papers between 1998 and 2019.

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Bibliography

2019
HACER: an atlas of human active enhancers to interpret regulatory variants.
Nucleic Acids Research, 2019

2018
RnaSeqSampleSize: real data based sample size estimation for RNA sequencing.
BMC Bioinformatics, 2018

Strategies for processing and quality control of Illumina genotyping arrays.
Briefings in Bioinformatics, 2018

Power and sample size calculations for high-throughput sequencing-based experiments.
Briefings in Bioinformatics, 2018

2017
Functional data classification using covariate-adjusted subspace projection.
Computational Statistics & Data Analysis, 2017

StrandScript: evaluation of Illumina genotyping array design and strand correction.
Bioinformatics, 2017

2016
Evidence Combination From an Evolutionary Game Theory Perspective.
IEEE Trans. Cybernetics, 2016

Mitochondria sequence mapping strategies and practicability of mitochondria variant detection from exome and RNA sequencing data.
Briefings in Bioinformatics, 2016

2015
SWATH-MS in proteomics: current status.
I. J. Computational Biology and Drug Design, 2015

NGSPERL: a semi-automated framework for large scale next generation sequencing data analysis.
I. J. Computational Biology and Drug Design, 2015

Impact of Preference and Equivocators on Opinion Dynamics with Evolutionary Game Framework.
CoRR, 2015

Genome measures used for quality control are dependent on gene function and ancestry.
Bioinformatics, 2015


2014
Implementation and evaluation of an integrated computerized asthma management system in a pediatric emergency department: A randomized clinical trial.
I. J. Medical Informatics, 2014

A comparison of microRNA sequencing reproducibility and noise reduction using mirVana and TRIzol isolation methods.
I. J. Computational Biology and Drug Design, 2014

Sample size determination for paired right-censored data based on the difference of Kaplan-Meier estimates.
Computational Statistics & Data Analysis, 2014

CLIP-EZ: a computational tool for HITS-CLIP data analysis.
BMC Bioinformatics, 2014

Heatmap3: an improved heatmap package with more powerful and convenient features.
BMC Bioinformatics, 2014

DupChecker: a bioconductor package for checking high-throughput genomic data redundancy in meta-analysis.
BMC Bioinformatics, 2014

Detection of internal exon deletion with exon Del.
BMC Bioinformatics, 2014

2013
An asthma management system in a pediatric emergency department.
I. J. Medical Informatics, 2013

Sample size calculation for differential expression analysis of RNA-seq data under Poisson distribution.
I. J. Computational Biology and Drug Design, 2013

Co-expression network analysis identifies Spleen Tyrosine Kinase (SYK) as a candidate oncogenic driver in a subset of small-cell lung cancer.
BMC Systems Biology, 2013

Gene and isoform expression signatures associated with tumor stage in kidney renal clear cell carcinoma.
BMC Systems Biology, 2013

Sample size calculation based on exact test for assessing differential expression analysis in RNA-seq data.
BMC Bioinformatics, 2013

MitoSeek: extracting mitochondria information and performing high-throughput mitochondria sequencing analysis.
Bioinformatics, 2013

2012
Statistical aspects of omics data analysis using the random compound covariate.
BMC Systems Biology, 2012

Advances in systems biology: computational algorithms and applications.
BMC Systems Biology, 2012

2011
Analyzing survival curves at a fixed point in time for paired and clustered right-censored data.
Computational Statistics & Data Analysis, 2011

Wave-spec: a preprocessing package for mass spectrometry data.
Bioinformatics, 2011

2009
Web-based interrogation of gene expression signatures using EXALT.
BMC Bioinformatics, 2009

A novel comprehensive wave-form MS data processing method.
Bioinformatics, 2009

2008
Use of normalization methods for analysis of microarrays containing a high degree of gene effects.
BMC Bioinformatics, 2008

2007
A Practical Question Based on Cross-Platform microarray Data Normalization: are Boec More Like Large Vessel or microvascular Endothelial Cells or Neither of Them?
J. Bioinformatics and Computational Biology, 2007

Wavelet-based procedures for proteomic mass spectrometry data processing.
Computational Statistics & Data Analysis, 2007

2000
Registration of Physical Space to Laparoscopic Image Space for use in Minimally Invasive Hepatic Surgery.
IEEE Trans. Med. Imaging, 2000

1998
Visual Assessment of the Accuracy of Retrospective Registration of MR and CT Images of the Brain.
IEEE Trans. Med. Imaging, 1998


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